Factsheet for GSMUA_Achr5P17750_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

plastid 4
mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0815600-01	Rice	cytosol, endoplasmic reticulum, peroxisome	56.32	55.49
Zm00001d018469_P001	Maize	cytosol, plastid	55.46	53.73
TraesCS6A01G386700.1	Wheat	cytosol	53.96	53.28
EES07748	Sorghum	plastid	55.46	53.18
TraesCS6D01G371300.1	Wheat	cytosol	53.53	52.85
TraesCS6B01G425800.1	Wheat	cytosol	53.75	52.73
HORVU6Hr1G090270.1	Barley	cytosol, peroxisome, plastid	53.53	51.02
VIT_00s0270g00100.t01	Wine grape	plastid	49.89	50.54
Bra010051.1-P	Field mustard	cytosol	48.18	50.0
CDY00247	Canola	cytosol	48.18	50.0
KRH24351	Soybean	cytosol	49.25	49.78
CDX86937	Canola	cytosol	47.97	49.67
KRH39817	Soybean	cytosol	49.46	49.46
AT5G62030.1	Thale cress	cytosol	47.97	49.45
Solyc06g066300.1.1	Tomato	cytosol	47.75	46.17
PGSC0003DMT400043231	Potato	cytosol	47.11	45.74
GSMUA_Achr1P13430_001	Banana	cytosol	15.63	14.37

Protein Annotations

MapMan:17.5.2.2.1	Gene3D:3.40.50.11840	Gene3D:3.40.50.11850	Gene3D:3.40.50.11860	InterPro:DPH1/DPH2	InterPro:DPH1/DPH2_euk_archaea
GO:GO:0006412	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0017183	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr5G17750_001	EnsemblPlants:GSMUA_Achr5P17750_001	EnsemblPlants:GSMUA_Achr5T17750_001	UniProt:M0SZF4
PFAM:PF01866	PIRSF:PIRSF004967	PANTHER:PTHR10762	PANTHER:PTHR10762:SF1	TIGRFAMs:TIGR00322	UniParc:UPI000295B046
SEG:seg	:	:	:	:	:

Description

Putative Diphthamide biosynthesis protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G17750_001]

Coordinates

chr5:-:18465640..18469333

Molecular Weight (calculated)

50674.9 Da

IEP (calculated)

6.113

GRAVY (calculated)

0.084

Length

467 amino acids

Sequence
(BLAST)

001: MFVSVWLFYR PEWIPRLTLT LTCSQHAPSR SPGPSLQPFV TGGLGMEADA VSSSAAAALP SLSLSNLSNP NSNPNGSVDA SKRKKAAAAP KRFVKSQIPE
101: SILSDPAINS AAAILPSNYD FEVHKTVHRL ASAASRRPAL QLPDGLLMYA LPLADILLSA STLRLDDVLI LADPTYGACC LDDYAASALA ADQLIHYGHS
201: CLVPVPSSRL PVLYVFVSIR VDFVSAVQAA KSLLSAEGFD ITVPQAKPLS AGEVLGCTAP TIPRSKGIEA IVFVADGRFH LEAFMIANPG VPAFRYDPYL
301: GILVLEEYDH KGMKTARKDA ILAAREAKRW GVILGTLGRQ GNSRVLDRVV EHMEEKALEW TVVLMSEISP ARIALFGDSV DAWVQIACPR LSIDWGEGFT
401: KPMLTTFELD IALGYSDDLQ ADYPMDYYSQ DGGDWNSSYA KRKPQNSVAK LQNKFAWECM LVLTLSL

Best Arabidopsis Sequence Match ( AT5G62030.1 )
(BLAST)

001: MELSDPNNGK TNKPKQPPKR FIKNQIPDSI LGDASLNAAI SILPSIYHFE VHKCVWRIKT SNAKRIALQL PEGLLMYALT LSDIFTSFAG ASHCFVLGDV
101: TYGACCVDDF SACALGADLL IHYGHSCLVP IDSTKIPCLY VFVEIQIDVK CLLNTIHLNL ASDVKNIILA GTIQFTSAIR AVKPELEKQG FNVLIPQSKP
201: LSAGEVLGCT APKVKTVEDC KDQVLVFVAD GRFHLEAFMI ANPKIKAFRY DPYLGKLFLE EYDHKGMRET RMRAIARARE AKTWGIVLGT LGRQGNPKIL
301: ERLEKKMMEK GIDSTVVLMS ELSPTRVALF EDSVDAWVQI ACPRLSIDWG EAFLKPLLTT FEAEIALGFI RGWWENDSSS RVNSSSGCCK EDKETSCACK
401: NENVKDDKKD NDGALDGDYP MDYYAQEGGE WNSSYLKKSS RPIRRNPLPS SVV

Arabidopsis Description

Diphthamide synthesis DPH2 family protein [Source:UniProtKB/TrEMBL;Acc:Q8RWW3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.