Factsheet for TraesCS6D01G371300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G386700.1	Wheat	cytosol	98.1	98.1
TraesCS6B01G425800.1	Wheat	cytosol	98.52	97.9
HORVU6Hr1G090270.1	Barley	cytosol, peroxisome, plastid	95.35	92.04
Os02t0815600-01	Rice	cytosol, endoplasmic reticulum, peroxisome	84.57	84.39
Zm00001d018469_P001	Maize	cytosol, plastid	83.3	81.74
EES07748	Sorghum	plastid	83.72	81.31
GSMUA_Achr5P17750_001	Banana	mitochondrion, plasma membrane	52.85	53.53
Bra010051.1-P	Field mustard	cytosol	50.74	53.33
CDY00247	Canola	cytosol	50.74	53.33
CDX86937	Canola	cytosol	50.53	52.99
AT5G62030.1	Thale cress	cytosol	49.89	52.1
KRH24351	Soybean	cytosol	49.89	51.08
VIT_00s0270g00100.t01	Wine grape	plastid	49.68	50.98
KRH39817	Soybean	cytosol	49.68	50.32
Solyc06g066300.1.1	Tomato	cytosol	49.47	48.45
PGSC0003DMT400043231	Potato	cytosol	48.84	48.02

Protein Annotations

EnsemblPlants:TraesCS6D01G371300.1	EnsemblPlantsGene:TraesCS6D01G371300	Gene3D:3.40.50.11840	Gene3D:3.40.50.11850	Gene3D:3.40.50.11860	GO:GO:0006412
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0017183
GO:GO:0019538	InterPro:DPH1/DPH2	InterPro:DPH1/DPH2_euk_archaea	ncoils:Coil	PANTHER:PTHR10762	PANTHER:PTHR10762:SF1
PFAM:PF01866	PIRSF:PIRSF004967	SEG:seg	TIGRFAMs:TIGR00322	MapMan:17.5.2.2.1	:

Description

No Description!

Coordinates

chr6D:-:456559733..456561905

Molecular Weight (calculated)

50344.5 Da

IEP (calculated)

6.883

GRAVY (calculated)

-0.012

Length

473 amino acids

Sequence
(BLAST)

001: MDADDPSTSL AVTAAGAPQS SAKKKPAPKR FIHTPIPASI LNDPTLAAAA TSLLPAAYNF ELHKTAHRIR SSGARRAALQ LPEGLLLFSL PLSHLLGPFL
101: AEDPSNDVLI LADPTYGACC LGDRPAKALA ADLLVHYGHS CLVPVTSSLL PVLYVFVEIR VDALRLAAAV RGAFPDPAAA PRLALAGTVQ FIAAVHAARE
201: MLTRDGYRDI VVPQAKPLSA GEILGCTAPT LKKAEGVGVV VFVADGRFHL EAFMIANPAV KAYRFDPFLG VLVLEEYDHV GMKQARKEAV LAARKAKSWG
301: VVLGTLGRQG SLKVLDRVVE HLEEKGLDHT VVLMSELSPT RMELFGDSVD AWVQIACPRL SIDWGEGFKR PVLTTFEFDV ALGYVPGWWE KGSRQNGGGG
401: GGSGCCSASG TCGNGDCSSG DCGGDDFGGE YPMDYYSQDG GDWNGCYMKK KPSTGERKPR VRIGSSVQVE EKQ

Best Arabidopsis Sequence Match ( AT5G62030.1 )
(BLAST)

001: MELSDPNNGK TNKPKQPPKR FIKNQIPDSI LGDASLNAAI SILPSIYHFE VHKCVWRIKT SNAKRIALQL PEGLLMYALT LSDIFTSFAG ASHCFVLGDV
101: TYGACCVDDF SACALGADLL IHYGHSCLVP IDSTKIPCLY VFVEIQIDVK CLLNTIHLNL ASDVKNIILA GTIQFTSAIR AVKPELEKQG FNVLIPQSKP
201: LSAGEVLGCT APKVKTVEDC KDQVLVFVAD GRFHLEAFMI ANPKIKAFRY DPYLGKLFLE EYDHKGMRET RMRAIARARE AKTWGIVLGT LGRQGNPKIL
301: ERLEKKMMEK GIDSTVVLMS ELSPTRVALF EDSVDAWVQI ACPRLSIDWG EAFLKPLLTT FEAEIALGFI RGWWENDSSS RVNSSSGCCK EDKETSCACK
401: NENVKDDKKD NDGALDGDYP MDYYAQEGGE WNSSYLKKSS RPIRRNPLPS SVV

Arabidopsis Description

Diphthamide synthesis DPH2 family protein [Source:UniProtKB/TrEMBL;Acc:Q8RWW3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.