Factsheet for PGSC0003DMT400043231

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g066300.1.1	Tomato	cytosol	90.02	89.65
AT5G62030.1	Thale cress	cytosol	61.95	65.78
CDX86937	Canola	cytosol	60.91	64.97
Bra010051.1-P	Field mustard	cytosol	60.71	64.89
CDY00247	Canola	cytosol	60.71	64.89
VIT_00s0270g00100.t01	Wine grape	plastid	61.75	64.43
KRH24351	Soybean	cytosol	60.91	63.42
KRH39817	Soybean	cytosol	60.5	62.31
TraesCS6A01G386700.1	Wheat	cytosol	48.44	49.26
TraesCS6B01G425800.1	Wheat	cytosol	48.44	48.95
TraesCS6D01G371300.1	Wheat	cytosol	48.02	48.84
HORVU6Hr1G090270.1	Barley	cytosol, peroxisome, plastid	48.44	47.55
Os02t0815600-01	Rice	cytosol, endoplasmic reticulum, peroxisome	46.78	47.47
Zm00001d018469_P001	Maize	cytosol, plastid	47.4	47.3
EES07748	Sorghum	plastid	47.82	47.23
GSMUA_Achr5P17750_001	Banana	mitochondrion, plasma membrane	45.74	47.11
PGSC0003DMT400072523	Potato	cytosol	17.26	16.67

Protein Annotations

EntrezGene:102581184	MapMan:17.5.2.2.1	Gene3D:3.40.50.11840	Gene3D:3.40.50.11850	Gene3D:3.40.50.11860	InterPro:DPH1/DPH2
InterPro:DPH1/DPH2_euk_archaea	GO:GO:0006412	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0017183	GO:GO:0019538	UniProt:M1BEB0	PFAM:PF01866	EnsemblPlantsGene:PGSC0003DMG400016779
PGSC:PGSC0003DMG400016779	EnsemblPlants:PGSC0003DMT400043231	PIRSF:PIRSF004967	PANTHER:PTHR10762	PANTHER:PTHR10762:SF1	TIGRFAMs:TIGR00322
UniParc:UPI000296641B	RefSeq:XP_006365966.1	RefSeq:XP_015160163.1	SEG:seg	:	:

Description

Diphthamide biosynthesis protein [Source:PGSC_GENE;Acc:PGSC0003DMG400016779]

Coordinates

chr6:+:45263805..45266480

Molecular Weight (calculated)

53336.8 Da

IEP (calculated)

5.693

GRAVY (calculated)

-0.193

Length

481 amino acids

Sequence
(BLAST)

001: MEKEHGDLLP LNPTPAAATT TAVDAGDQQP LQQSTRSRPK RFVKNQMPDS ILNDAALNAA ISLLPQNYNF EIHKCVWRVR TSGAKRVALQ FPEGLLMYSL
101: IISDILSTFT SATHCFILGD VTFGACCVDD LSAGALSADL LIHFGHSCLV PIDSTTIPCL YIFVEISIDV HRLLNELKLN FYNSDTYDNI IMAGTIQFAS
201: AIRAVKPELE KMGFSILIPQ AKPLSAGEVL GCTAPSVKNR FSDGENVVLV FVADGRFHLE AFMIANPGIK TYRYDPFIGK LFVEEYDHKG MKEERKRAIE
301: KARGVKNWGI VLGTLGRQGN PRILDRLEKK MSEKGMTWTV VLMSEISPTR IALFEDAVDA WIQIACPRLS IDWGDAFKKP LLTPFEAEIA LGDLSGWWER
401: KTSVNSDICC DEDMKCSKNE SCGACDNDGE KVKEESQVDY PMDYYAQDGG EWNSCYSKKP ARLSHRNSQS CNGASAIKSN S

Best Arabidopsis Sequence Match ( AT5G62030.1 )
(BLAST)

001: MELSDPNNGK TNKPKQPPKR FIKNQIPDSI LGDASLNAAI SILPSIYHFE VHKCVWRIKT SNAKRIALQL PEGLLMYALT LSDIFTSFAG ASHCFVLGDV
101: TYGACCVDDF SACALGADLL IHYGHSCLVP IDSTKIPCLY VFVEIQIDVK CLLNTIHLNL ASDVKNIILA GTIQFTSAIR AVKPELEKQG FNVLIPQSKP
201: LSAGEVLGCT APKVKTVEDC KDQVLVFVAD GRFHLEAFMI ANPKIKAFRY DPYLGKLFLE EYDHKGMRET RMRAIARARE AKTWGIVLGT LGRQGNPKIL
301: ERLEKKMMEK GIDSTVVLMS ELSPTRVALF EDSVDAWVQI ACPRLSIDWG EAFLKPLLTT FEAEIALGFI RGWWENDSSS RVNSSSGCCK EDKETSCACK
401: NENVKDDKKD NDGALDGDYP MDYYAQEGGE WNSSYLKKSS RPIRRNPLPS SVV

Arabidopsis Description

Diphthamide synthesis DPH2 family protein [Source:UniProtKB/TrEMBL;Acc:Q8RWW3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.