Factsheet for HORVU6Hr1G090270.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G386700.1	Wheat	cytosol	92.24	95.56
TraesCS6D01G371300.1	Wheat	cytosol	92.04	95.35
TraesCS6B01G425800.1	Wheat	cytosol	92.24	94.96
Os02t0815600-01	Rice	cytosol, endoplasmic reticulum, peroxisome	79.59	82.28
EES07748	Sorghum	plastid	80.0	80.49
Zm00001d018469_P001	Maize	cytosol, plastid	78.57	79.88
GSMUA_Achr5P17750_001	Banana	mitochondrion, plasma membrane	51.02	53.53
Bra010051.1-P	Field mustard	cytosol	48.98	53.33
CDY00247	Canola	cytosol	48.98	53.33
CDX86937	Canola	cytosol	48.78	52.99
AT5G62030.1	Thale cress	cytosol	48.37	52.32
KRH24351	Soybean	cytosol	48.16	51.08
VIT_00s0270g00100.t01	Wine grape	plastid	47.55	50.54
KRH39817	Soybean	cytosol	47.35	49.68
Solyc06g066300.1.1	Tomato	cytosol	48.37	49.07
PGSC0003DMT400043231	Potato	cytosol	47.55	48.44
HORVU4Hr1G013960.2	Barley	plastid	15.31	13.44

Protein Annotations

MapMan:17.5.2.2.1	Gene3D:3.40.50.11840	Gene3D:3.40.50.11850	Gene3D:3.40.50.11860	UniProt:A0A287V5E1	InterPro:DPH1/DPH2
InterPro:DPH1/DPH2_euk_archaea	GO:GO:0006412	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0017183	GO:GO:0019538	EnsemblPlantsGene:HORVU6Hr1G090270	EnsemblPlants:HORVU6Hr1G090270.1	PFAM:PF01866
PIRSF:PIRSF004967	PANTHER:PTHR10762	PANTHER:PTHR10762:SF1	TIGRFAMs:TIGR00322	UniParc:UPI000B462D49	SEG:seg

Description

No Description!

Coordinates

chrchr6H:-:571855612..571858058

Molecular Weight (calculated)

51877.2 Da

IEP (calculated)

6.726

GRAVY (calculated)

0.009

Length

490 amino acids

Sequence
(BLAST)

001: RLSPPAADAA AAAAAAMDAG DPSTSLAVTA VDAPQSSAKK KPAPKRFIHT PIPASILNDP TLAAAATSLL PAAYNFELHK TAHRIRSSGA RRAALQLPEG
101: LLLFSLPISH LLGPFLAEDP SNDVLILADP TYGACCLGDR PAKALAADLL VHYGHSCLVP VTSSLLPVLY VFVEIRVDAL RLAAAIRGAF PDPATAPRLA
201: LAGTVQFIAA VHAAREMLTR DGYRDILVPQ AKPLSAGEIL GCTAPTLKKA EGVAVVVFVA DGRFHLEAFM IANPAVKAYR FDPFLGVLVL EEYDHVGMKQ
301: ARKEAVLAAR KAKSWGVVLG TLGRQGSLKV LDRVVEHLEE KGLEHTVVLM SELSPTRMEL FGDSVDAWVQ IACPRLSIDW GEGFKRPVLT TFEFDVALGY
401: VSGWWEKGSG QNGGGPGGSG CCSGSGTCGN GDCSNGDCGG DDFGGEYPMD YYSQDGGDWN GCYMKKKPST GERKPRVRIA GSNVQVEEKQ

Best Arabidopsis Sequence Match ( AT5G62030.1 )
(BLAST)

001: MELSDPNNGK TNKPKQPPKR FIKNQIPDSI LGDASLNAAI SILPSIYHFE VHKCVWRIKT SNAKRIALQL PEGLLMYALT LSDIFTSFAG ASHCFVLGDV
101: TYGACCVDDF SACALGADLL IHYGHSCLVP IDSTKIPCLY VFVEIQIDVK CLLNTIHLNL ASDVKNIILA GTIQFTSAIR AVKPELEKQG FNVLIPQSKP
201: LSAGEVLGCT APKVKTVEDC KDQVLVFVAD GRFHLEAFMI ANPKIKAFRY DPYLGKLFLE EYDHKGMRET RMRAIARARE AKTWGIVLGT LGRQGNPKIL
301: ERLEKKMMEK GIDSTVVLMS ELSPTRVALF EDSVDAWVQI ACPRLSIDWG EAFLKPLLTT FEAEIALGFI RGWWENDSSS RVNSSSGCCK EDKETSCACK
401: NENVKDDKKD NDGALDGDYP MDYYAQEGGE WNSSYLKKSS RPIRRNPLPS SVV

Arabidopsis Description

Diphthamide synthesis DPH2 family protein [Source:UniProtKB/TrEMBL;Acc:Q8RWW3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.