CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

plastid 1
nucleus 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23572	Soybean	cytosol	62.81	86.06
VIT_05s0094g00370.t01	Wine grape	cytosol	57.37	64.62
Solyc10g081540.1.1	Tomato	cytosol	49.82	57.03
PGSC0003DMT400072523	Potato	cytosol	49.47	56.63
Bra007464.1-P	Field mustard	cytosol	48.07	56.26
CDX71889	Canola	nucleus	48.07	55.8
AT3G59630.2	Thale cress	cytoskeleton, cytosol, nucleus	47.89	55.6
GSMUA_Achr1P13430_001	Banana	cytosol	48.07	53.94
TraesCS4B01G083800.1	Wheat	cytosol, mitochondrion	45.79	51.48
EER90542	Sorghum	cytosol	45.96	50.97
Os11t0265600-00	Rice	cytosol	44.56	50.2
Zm00001d034797_P002	Maize	cytosol	44.21	47.01
HORVU4Hr1G013960.2	Barley	plastid	45.96	46.95
CDY70834	Canola	cytosol	16.84	44.24
CDY69029	Canola	cytosol	16.49	42.73
KRH24351	Soybean	cytosol	14.91	18.4
KRH39817	Soybean	cytosol	14.56	17.77

Protein Annotations

MapMan:17.5.2.2.2	Gene3D:3.40.50.11840	Gene3D:3.40.50.11850	Gene3D:3.40.50.11860	UniProt:A0A0R0G5G0	EMBL:ACUP02009109
InterPro:DHP2_euk	InterPro:DPH1/DPH2	EnsemblPlantsGene:GLYMA_15G008200	GO:GO:0003674	GO:GO:0003824	GO:GO:0006412
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
GO:GO:0017183	GO:GO:0019538	EnsemblPlants:KRH09732	ProteinID:KRH09732	ProteinID:KRH09732.1	PFAM:PF01866
PANTHER:PTHR10762	PANTHER:PTHR10762:SF2	TIGRFAMs:TIGR00272	TIGRFAMs:TIGR00322	UniParc:UPI0006EDC696	:

Description

hypothetical protein

Coordinates

chr15:+:663381..668017

Molecular Weight (calculated)

63934.5 Da

IEP (calculated)

6.812

GRAVY (calculated)

-0.186

Length

570 amino acids

Sequence
(BLAST)

001: TKVLYASVCD LAARVRALAR EKKRREIHKT TYRKTLFIDS ERAERTPIER SCQQRALRFR TPQRAIDLHC FNFTPSLCLV MDFESNYDIA ASANFIHTHN
101: FIKVALQFPD NLLKHSTRVV TALRNTLQST EVGLFVMADT AYGSCCIDEV GASHINADCV IHYGHTCFSP TTTLPAFCVF GKASICIADC VESMSKYALT
201: NSKPIMVLFG LEYAHSMQRI KEALLESSMS CRFDPKSEVH FADVPSSVMF PSKDIKKINV LQEPVSDCNG ASGTMYSIGG LTWKLPEGQS MDDYLVFWIG
301: HDDSAFANVV LTFNACEIVR YDANENRMVT DLFQHRRILK RRYYLVERAK DANIVGILVG TLGVAGYLHI INQMMELITG AGKKAYTLVM GRPNPAKLAN
401: FPECDVFLYV SCAQTALLDS KEYLAPVITP FEAMIAFNRG SQWTGAYVME FRDLINLPQM GVGNQEEEEA RFSFLKGGYV EDFENQACIS SENVEEERET
501: LALVNATEKA LQLRNNSNVL MKGSARSGAE FLANRSYQGL NMSSENTSPE PYLIGRRGRA SGYEDEKNKQ

Best Arabidopsis Sequence Match ( AT3G59630.1 )
(BLAST)

001: MELEFESKYE INRTAEFIIS KSFTRIALQF PDELLKDSTK VVSALKSKTR LLTDREVRFF VMADTTYGSC CIDEVGALHI DSECVVHYGQ TCLSPTSVLP
101: AFFVFGKASI NVSSCVKHLI DYASKSDKPI MILYGLEYAH VIPQIREELG LSKTDSQLSV ANVLCSFISP SKDPRESMEH PRPYSESDSS DSLSSSRSYR
201: LGGLTWDLPE GSKIEDYLLF WIGSDSSAFA NVVLTFNGCD IVRYDAEEDS LVTEFYQQRR ILKRRYYLVE KAKDANIIGI LVGTLGVAGY LHMIHHMQAL
301: ISAAGKKSYI LAMGRPNPAK LANFPECDVF IYISCAQTAL LDSKEFMSPV ITPFEANLAF SRGSEWTGAY LMHFQDVINS VKSESEAHIG SEEPRFSFFQ
401: GGYVEDHKTN DQAKNGEEDT GETMTLVQAA EKALQLRGND HNSLTKQTAA KSGPEYFLNR VYRGLEINSE NTLPEPYIVG RSGKASGYKH E

Arabidopsis Description

AT3g59630/T16L24_180 [Source:UniProtKB/TrEMBL;Acc:Q9M1A5]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.