CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09732	Soybean	cytosol, mitochondrion, nucleus	86.06	62.81
VIT_05s0094g00370.t01	Wine grape	cytosol	66.35	54.55
PGSC0003DMT400072523	Potato	cytosol	58.17	48.59
Solyc10g081540.1.1	Tomato	cytosol	57.93	48.39
Bra007464.1-P	Field mustard	cytosol	54.33	46.41
AT3G59630.2	Thale cress	cytoskeleton, cytosol, nucleus	54.33	46.03
CDX71889	Canola	nucleus	53.85	45.62
GSMUA_Achr1P13430_001	Banana	cytosol	54.33	44.49
TraesCS4B01G083800.1	Wheat	cytosol, mitochondrion	50.72	41.62
EER90542	Sorghum	cytosol	50.96	41.25
Os11t0265600-00	Rice	cytosol	49.76	40.91
Zm00001d034797_P002	Maize	cytosol	48.56	37.69
HORVU4Hr1G013960.2	Barley	plastid	50.0	37.28
CDY70834	Canola	cytosol	16.11	30.88
CDY69029	Canola	cytosol	16.11	30.45
KRH24351	Soybean	cytosol	16.11	14.5
KRH39817	Soybean	cytosol	15.62	13.92

Protein Annotations

MapMan:17.5.2.2.2	Gene3D:3.40.50.11840	Gene3D:3.40.50.11860	UniProt:A0A0R0HCD5	EMBL:ACUP02008474	InterPro:DHP2_euk
InterPro:DPH1/DPH2	EnsemblPlantsGene:GLYMA_13G365100	GO:GO:0005575	GO:GO:0006412	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0017183
GO:GO:0019538	EnsemblPlants:KRH23572	ProteinID:KRH23572	ProteinID:KRH23572.1	PFAM:PF01866	PANTHER:PTHR10762
PANTHER:PTHR10762:SF2	TIGRFAMs:TIGR00322	UniParc:UPI0006ED4D9A	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr13:-:45132810..45136767

Molecular Weight (calculated)

46711.4 Da

IEP (calculated)

4.705

GRAVY (calculated)

-0.251

Length

416 amino acids

Sequence
(BLAST)

001: MDFESNYDIA ASANFIHTHN FTRVALQNHM YYGSCCIDEV GASHINADFV IHYGHTCFSP TTTLPVFCVF GKASICVADC VESMSKYALR NSKPIMVLFG
101: LEYAHSMRQI KEALLESSMS CRYDPMPEVN GLQEPVSDCN GASGTVYSIG GLAWKLPEGQ SMDDYLLFWI GHDDSAFANV VLTFNACEIV RYDANENRMV
201: TDLFQQKRIL KPGYLHIINQ MMELITGAGK KAYTLVMGRP NPAKLANFPE FDFYQCDVFL YVSCAQTALL DSKEYLAPVI TPFEAMIAFN RGSQWTGAYV
301: MEFRDLINLP QMEVGNQEEE ARFSFLKGGY VDDFENQENA EEERETLALV NATEKALQLQ NNSNALMKGN ARSGVEFLAN RSYQGLNMSS ENASPEPYLI
401: GRRGRASGYE DEKKKQ

Best Arabidopsis Sequence Match ( AT3G59630.1 )
(BLAST)

001: MELEFESKYE INRTAEFIIS KSFTRIALQF PDELLKDSTK VVSALKSKTR LLTDREVRFF VMADTTYGSC CIDEVGALHI DSECVVHYGQ TCLSPTSVLP
101: AFFVFGKASI NVSSCVKHLI DYASKSDKPI MILYGLEYAH VIPQIREELG LSKTDSQLSV ANVLCSFISP SKDPRESMEH PRPYSESDSS DSLSSSRSYR
201: LGGLTWDLPE GSKIEDYLLF WIGSDSSAFA NVVLTFNGCD IVRYDAEEDS LVTEFYQQRR ILKRRYYLVE KAKDANIIGI LVGTLGVAGY LHMIHHMQAL
301: ISAAGKKSYI LAMGRPNPAK LANFPECDVF IYISCAQTAL LDSKEFMSPV ITPFEANLAF SRGSEWTGAY LMHFQDVINS VKSESEAHIG SEEPRFSFFQ
401: GGYVEDHKTN DQAKNGEEDT GETMTLVQAA EKALQLRGND HNSLTKQTAA KSGPEYFLNR VYRGLEINSE NTLPEPYIVG RSGKASGYKH E

Arabidopsis Description

AT3g59630/T16L24_180 [Source:UniProtKB/TrEMBL;Acc:Q9M1A5]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.