Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 3
- cytosol 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51405 | Canola | nucleus | 26.32 | 90.55 |
| CDY02487 | Canola | nucleus, plastid | 58.81 | 83.44 |
| CDY61477 | Canola | nucleus, plastid | 56.75 | 82.39 |
| CDY08216 | Canola | nucleus | 54.0 | 71.95 |
| CDY26148 | Canola | nucleus, plastid | 54.69 | 66.95 |
| AT1G54060.1 | Thale cress | nucleus | 54.0 | 61.62 |
| CDX75751 | Canola | nucleus | 33.41 | 39.25 |
| CDY33246 | Canola | nucleus | 27.23 | 38.89 |
| CDY39099 | Canola | nucleus | 27.92 | 38.49 |
| CDY36316 | Canola | nucleus | 21.05 | 36.51 |
| CDY39101 | Canola | nucleus, plastid | 25.17 | 36.07 |
| Solyc03g122030.1.1 | Tomato | nucleus | 29.75 | 35.81 |
| VIT_09s0002g00720.t01 | Wine grape | nucleus | 29.29 | 35.16 |
| PGSC0003DMT400088401 | Potato | nucleus, plastid | 29.75 | 34.85 |
| KRH47662 | Soybean | nucleus, plastid | 29.29 | 34.78 |
| KRH06239 | Soybean | nucleus | 29.29 | 34.59 |
| CDY00995 | Canola | nucleus | 20.14 | 34.38 |
| CDX70144 | Canola | cytosol | 19.22 | 33.6 |
| CDX71939 | Canola | nucleus, plastid | 20.82 | 30.23 |
| GSMUA_Achr9P14340_001 | Banana | nucleus | 24.26 | 29.28 |
| CDX98311 | Canola | nucleus | 20.37 | 28.53 |
| GSMUA_Achr8P23650_001 | Banana | nucleus | 22.2 | 28.45 |
| CDX67755 | Canola | nucleus | 20.37 | 28.16 |
| CDX98849 | Canola | cytosol | 19.22 | 27.36 |
| TraesCS6A01G198600.1 | Wheat | nucleus, plastid | 22.43 | 26.49 |
| Os04t0445600-00 | Rice | nucleus | 24.94 | 26.14 |
| Zm00001d025514_P001 | Maize | nucleus | 23.11 | 25.77 |
| Zm00001d003549_P001 | Maize | nucleus | 22.65 | 25.71 |
| EES12241 | Sorghum | nucleus | 23.8 | 25.49 |
| CDX93016 | Canola | nucleus | 11.44 | 25.25 |
| TraesCS6B01G230000.1 | Wheat | nucleus | 24.03 | 25.24 |
| HORVU6Hr1G050140.1 | Barley | nucleus, plastid | 24.03 | 25.12 |
| GSMUA_Achr3P05880_001 | Banana | nucleus | 23.11 | 25.0 |
| TraesCS2D01G311800.1 | Wheat | nucleus, plastid | 23.57 | 24.94 |
| Os02t0565000-01 | Rice | nucleus | 23.8 | 24.82 |
| TraesCS2B01G332100.1 | Wheat | nucleus, plastid | 23.57 | 24.76 |
| TraesCS2A01G313300.1 | Wheat | nucleus, plastid | 23.57 | 24.76 |
| Zm00001d016876_P001 | Maize | nucleus, plastid | 22.65 | 24.63 |
| TraesCS6D01G184500.2 | Wheat | nucleus | 23.11 | 24.28 |
| Zm00001d010753_P001 | Maize | nucleus | 16.93 | 22.56 |
| KXG30464 | Sorghum | nucleus, plastid | 21.51 | 22.27 |
| CDX94808 | Canola | nucleus | 14.65 | 19.94 |
| HORVU2Hr1G077940.1 | Barley | cytosol, nucleus, plastid | 8.01 | 15.62 |
| Zm00001d042917_P001 | Maize | golgi, plasma membrane | 18.08 | 11.9 |
Protein Annotations
| EnsemblPlants:CDY33093 | EnsemblPlantsGene:GSBRNA2T00053746001 | InterPro:DRM/ARP | PANTHER:PTHR31307 | PANTHER:PTHR31307:SF35 | PFAM:PF05564 |
| PFAM:PF13837 | ProteinID:CDY33093 | ProteinID:CDY33093.1 | SEG:seg | UniParc:UPI0004EEC578 | UniProt:A0A078H8B0 |
| MapMan:15.5.20 | : | : | : | : | : |
Description
BnaC06g06860DBnaC06g06860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H8B0]
Coordinates
chrLK032305:-:427810..431129
Molecular Weight (calculated)
47634.2 Da
IEP (calculated)
7.897
GRAVY (calculated)
-0.694
Length
437 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEEDKTQSQ QSPRDALSPA PILPTSNVTV ASATKPPPSS SSQSPLALVV QTPSVNRNGR IGGGGGGGGR DDCWSEEATK VLINAWGDRF SEPGKGTLKQ
101: QQWHEVAEIV NESGQCKYAK TDVQCKNRID TVKKKYKQEK AKNGPSKWAF FKKLESLIGG GGNAPVGARS SGPMRWHFRK RSASETESES ESEPEHSAEN
201: LPPTQPLPKR LKMGESGVGD VAKAILGFTE AYEKAETAKL KLMMELEKER MKFAKEMELQ RMHFLITQVE ITRTNQEEER SKRDGDDDDR NVKNNGDKFI
301: AGVQRTVMTI IIMLLCYVIL SETRLWDDTV AGPAPENGLG ELRKHVSLAT VQSPPLSTDQ VTRSIVVTKG NNNVRGLRNL KMGPGRAPDS PTGSSSTPGT
401: PLTPGTPCDH FGPFSADKIP SAGEVDASSL TTYEWLV
101: QQWHEVAEIV NESGQCKYAK TDVQCKNRID TVKKKYKQEK AKNGPSKWAF FKKLESLIGG GGNAPVGARS SGPMRWHFRK RSASETESES ESEPEHSAEN
201: LPPTQPLPKR LKMGESGVGD VAKAILGFTE AYEKAETAKL KLMMELEKER MKFAKEMELQ RMHFLITQVE ITRTNQEEER SKRDGDDDDR NVKNNGDKFI
301: AGVQRTVMTI IIMLLCYVIL SETRLWDDTV AGPAPENGLG ELRKHVSLAT VQSPPLSTDQ VTRSIVVTKG NNNVRGLRNL KMGPGRAPDS PTGSSSTPGT
401: PLTPGTPCDH FGPFSADKIP SAGEVDASSL TTYEWLV
001: MEDDDEIQSI PSPGDSSLSP QAPPSPPILP TNDVTVAVVK KPQPGLSSQS PSMNALALVV HTPSVTGGGG SGNRNGRGGG GGSGGGGGGR DDCWSEEATK
101: VLIEAWGDRF SEPGKGTLKQ QHWKEVAEIV NKSRQCKYPK TDIQCKNRID TVKKKYKQEK AKIASGDGPS KWVFFKKLES LIGGTTTFIA SSKASEKAPM
201: GGALGNSRSS MFKRQTKGNQ IVQQQQEKRG SDSMRWHFRK RSASETESES DPEPEASPEE SAESLPPLQP IQPLSFHMPK RLKVDKSGGG GSGVGDVARA
301: ILGFTEAYEK AETAKLKLMA ELEKERMKFA KEMELQRMQF LKTQLEITQN NQEEEERSRQ RGERRIVDDD DDRNGKNNGN VSS
101: VLIEAWGDRF SEPGKGTLKQ QHWKEVAEIV NKSRQCKYPK TDIQCKNRID TVKKKYKQEK AKIASGDGPS KWVFFKKLES LIGGTTTFIA SSKASEKAPM
201: GGALGNSRSS MFKRQTKGNQ IVQQQQEKRG SDSMRWHFRK RSASETESES DPEPEASPEE SAESLPPLQP IQPLSFHMPK RLKVDKSGGG GSGVGDVARA
301: ILGFTEAYEK AETAKLKLMA ELEKERMKFA KEMELQRMQF LKTQLEITQN NQEEEERSRQ RGERRIVDDD DDRNGKNNGN VSS
Arabidopsis Description
ASIL1Trihelix transcription factor ASIL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYG2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.