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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra038147.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 97.21 97.21
CDY23801 Canola endoplasmic reticulum, extracellular, plasma membrane 96.28 96.28
CDY39938 Canola endoplasmic reticulum, extracellular, plasma membrane 91.16 90.74
CDX95293 Canola endoplasmic reticulum, extracellular, golgi 89.77 89.35
AT1G57620.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 79.53 80.66
KRH48283 Soybean cytosol 25.12 70.13
CDY31078 Canola endoplasmic reticulum 71.16 68.3
CDY20688 Canola endoplasmic reticulum, golgi, nucleus 70.23 67.41
CDX93498 Canola endoplasmic reticulum, golgi, plasma membrane 69.3 66.52
CDY50894 Canola endoplasmic reticulum, golgi, plasma membrane 69.3 66.52
KRH59179 Soybean endoplasmic reticulum 65.12 66.35
TraesCS7D01G170400.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 59.53 65.98
TraesCS7A01G169500.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 59.53 65.98
VIT_12s0034g01440.t01 Wine grape endoplasmic reticulum, extracellular 66.05 65.74
Zm00001d037163_P002 Maize extracellular, plasma membrane 62.33 63.51
Os06t0210100-01 Rice plastid 61.4 63.16
Solyc10g045640.1.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 62.79 63.08
Solyc01g104220.2.1 Tomato endoplasmic reticulum 61.4 62.26
EER88046 Sorghum endoplasmic reticulum 61.4 61.68
KRH43057 Soybean extracellular 44.65 61.54
GSMUA_Achr6P02320_001 Banana endoplasmic reticulum, plasma membrane 61.4 61.11
TraesCS6B01G361000.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 59.07 60.19
TraesCS6A01G330200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 59.07 60.19
PGSC0003DMT400061146 Potato extracellular 58.6 60.0
EES07590 Sorghum endoplasmic reticulum, extracellular, vacuole 57.67 59.9
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, plasma membrane 60.0 59.72
TraesCS6D01G309100.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 58.6 59.72
Os02t0768200-01 Rice endoplasmic reticulum, plasma membrane, vacuole 60.0 59.17
CDY04681 Canola endoplasmic reticulum 57.67 59.05
TraesCS7B01G074300.1 Wheat plasma membrane 59.07 58.8
Zm00001d018194_P001 Maize extracellular 45.12 57.74
KRH10436 Soybean endoplasmic reticulum 57.21 57.21
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, vacuole 58.14 57.08
GSMUA_Achr3P20310_001 Banana plasma membrane 56.74 56.48
Os09t0453200-00 Rice endoplasmic reticulum, plasma membrane 54.42 55.19
Zm00001d005857_P001 Maize cytosol, golgi 40.93 54.66
TraesCS5B01G233900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 52.56 54.07
EER96837 Sorghum extracellular 52.09 53.85
TraesCS5A01G235500.1 Wheat extracellular, vacuole 52.09 53.33
TraesCS5D01G242600.1 Wheat endoplasmic reticulum 52.09 53.33
CDX96570 Canola endoplasmic reticulum, extracellular, plasma membrane 57.67 53.22
CDY38827 Canola endoplasmic reticulum, extracellular, vacuole 57.67 52.1
KRH44035 Soybean endoplasmic reticulum, mitochondrion, plasma membrane 59.07 51.63
HORVU5Hr1G067730.1 Barley cytosol, peroxisome 52.56 50.22
CDY37184 Canola endoplasmic reticulum, peroxisome, plastid 11.63 50.0
CDY08168 Canola endoplasmic reticulum 37.21 48.48
Os08t0469400-00 Rice endoplasmic reticulum, extracellular, vacuole 30.7 48.18
CDX73906 Canola endoplasmic reticulum, extracellular, plasma membrane 45.58 47.12
CDX73903 Canola endoplasmic reticulum, extracellular, plasma membrane 45.58 47.12
CDY08577 Canola plasma membrane 45.58 46.67
CDY00971 Canola plasma membrane 45.58 46.67
HORVU7Hr1G035390.1 Barley mitochondrion, plastid 59.07 46.35
CDY00701 Canola plasma membrane 44.19 45.67
KXG25366 Sorghum plasma membrane 51.63 44.4
CDY36275 Canola endoplasmic reticulum, extracellular, plasma membrane 40.0 43.65
CDY00102 Canola cytosol 29.77 37.87
GSMUA_Achr6P10010_001 Banana nucleus, peroxisome, plasma membrane 55.81 37.74
CDY16181 Canola endoplasmic reticulum, plasma membrane, vacuole 37.21 37.38
CDX85047 Canola endoplasmic reticulum 36.74 36.92
CDX96872 Canola endoplasmic reticulum, extracellular, plasma membrane 35.35 35.68
CDX95934 Canola vacuole 34.88 34.88
CDY40925 Canola endoplasmic reticulum 34.88 34.88
CDY62212 Canola endoplasmic reticulum, extracellular, plasma membrane 34.42 34.74
CDY33785 Canola endoplasmic reticulum, extracellular, plasma membrane 33.95 34.43
CDY16125 Canola endoplasmic reticulum, extracellular, plasma membrane 33.95 34.43
CDY19998 Canola endoplasmic reticulum, extracellular 34.42 34.26
CDX85243 Canola mitochondrion 35.35 34.23
CDY45170 Canola endoplasmic reticulum, extracellular 33.49 33.64
CDY61620 Canola endoplasmic reticulum 33.49 33.64
CDY03005 Canola endoplasmic reticulum, extracellular, plasma membrane 33.02 33.18
CDY44411 Canola golgi, plasma membrane, plastid 33.95 32.88
CDY04053 Canola endoplasmic reticulum 33.95 32.74
CDY24142 Canola endoplasmic reticulum, plasma membrane, vacuole 32.56 32.71
CDY09334 Canola endoplasmic reticulum, extracellular, vacuole 32.09 31.94
CDY53680 Canola endoplasmic reticulum, extracellular, vacuole 30.7 30.56
Protein Annotations
MapMan:22.3.5.2GO:A0A078H2Z4UniProt:A0A078H2Z4EnsemblPlants:CDY31789ProteinID:CDY31789ProteinID:CDY31789.1
ncoils:CoilGO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783
GO:GO:0005789GO:GO:0016020GO:GO:0016021InterPro:GOLD_domEnsemblPlantsGene:GSBRNA2T00050460001InterPro:IPR009038
PFAM:PF01105PFscan:PS50866PANTHER:PTHR22811PANTHER:PTHR22811:SF76SMART:SM01190SignalP:SignalP-noTM
InterPro:TMP21-relatedTMHMM:TMhelixUniParc:UPI0004EBF65FSEG:seg::
Description
BnaC01g27450DBnaC01g27450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H2Z4]
Coordinates
chrLK032279:+:286882..289056
Molecular Weight (calculated)
24108.0 Da
IEP (calculated)
6.246
GRAVY (calculated)
0.043
Length
215 amino acids
Sequence
(BLAST)
001: MRREFATTLL LSTLVSFLVP ELISVGEAVW LNIPKTGTKC VSEEIQSKVV VLADYVVISD EHSIFPTVSV KVTSPYGSVL HHSENATHGQ FAFTTQESGT
101: YLACFEAVGN SHGNNDISIN LDWKTGIAAK DWDSIARKEK IEGVELELRK LEAAVEAIHE NLLYLRNREA DMRIVSEKTN SRVAWYSIMS LGICIVVTGL
201: QILYLKQYFE RKKLI
Best Arabidopsis Sequence Match ( AT1G57620.1 )
(BLAST)
001: MKKKMIPTTI LLSALIFSLS PICEAVWLTV PHTGSKCVSE EIQSNVIVLA DYLVISEEHS IFPTVSVKVT APYGTVLHHR ENTTNGQFAF TTQESGTYLA
101: CFEADAKSHG NKDFSINIDW KTGIAAKDWD SIARKEKIEG VELEFKKLEG AVEAIHENLI YLRNREAEMR IVSEKTNSRV AWYSIMSLGI CIVVSGLQIL
201: YLKQYFEKKK LI
Arabidopsis Description
CYBTransmembrane emp24 domain-containing protein p24delta4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FVU0]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.