Factsheet for TraesCS6A01G330200.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G361000.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	99.05	99.05
TraesCS6D01G309100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	98.1	98.1
Os02t0768200-01	Rice	endoplasmic reticulum, plasma membrane, vacuole	83.89	81.19
EES07590	Sorghum	endoplasmic reticulum, extracellular, vacuole	79.62	81.16
TraesCS7A01G169500.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	73.46	79.9
Zm00001d018194_P001	Maize	extracellular	63.03	79.17
KRH48283	Soybean	cytosol	25.59	70.13
GSMUA_Achr6P02320_001	Banana	endoplasmic reticulum, plasma membrane	69.67	68.06
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, plasma membrane	67.77	66.2
KRH59179	Soybean	endoplasmic reticulum	63.98	63.98
VIT_12s0034g01440.t01	Wine grape	endoplasmic reticulum, extracellular	63.98	62.5
GSMUA_Achr3P20310_001	Banana	plasma membrane	63.03	61.57
AT1G09580.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	62.56	60.83
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, vacuole	63.03	60.73
CDX95293	Canola	endoplasmic reticulum, extracellular, golgi	61.61	60.19
TraesCS5A01G235500.1	Wheat	extracellular, vacuole	59.72	60.0
Bra020010.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	60.19	59.91
CDY39938	Canola	endoplasmic reticulum, extracellular, plasma membrane	61.14	59.72
Bra027911.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	61.14	59.72
Bra030786.1-P	Field mustard	extracellular	59.72	59.72
KRH18772	Soybean	plasma membrane	60.66	59.53
Solyc10g045640.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	60.19	59.35
KRH16308	Soybean	endoplasmic reticulum	60.19	59.07
CDY31789	Canola	plasma membrane	60.19	59.07
KRH43057	Soybean	extracellular	43.6	58.97
AT1G57620.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	59.24	58.96
VIT_18s0001g03200.t01	Wine grape	endoplasmic reticulum	56.4	58.62
Solyc01g104220.2.1	Tomato	endoplasmic reticulum	58.77	58.49
AT1G21900.1	Thale cress	plasma membrane	59.72	58.33
Solyc11g013000.1.1	Tomato	plastid	57.82	58.1
PGSC0003DMT400061146	Potato	extracellular	57.82	58.1
KRH53215	Soybean	endoplasmic reticulum	58.29	58.02
KRH10436	Soybean	endoplasmic reticulum	58.77	57.67
KRH64707	Soybean	plasma membrane	58.77	57.67
Bra038147.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	58.77	57.67
PGSC0003DMT400002378	Potato	endoplasmic reticulum, extracellular, plasma membrane	57.35	57.62
CDY23801	Canola	endoplasmic reticulum, extracellular, plasma membrane	58.29	57.21
CDX93498	Canola	endoplasmic reticulum, golgi, plasma membrane	60.19	56.7
CDY31078	Canola	endoplasmic reticulum	59.72	56.25
CDY20688	Canola	endoplasmic reticulum, golgi, nucleus	59.72	56.25
CDY04681	Canola	endoplasmic reticulum	55.92	56.19
CDY50894	Canola	endoplasmic reticulum, golgi, plasma membrane	58.77	55.36
CDX96570	Canola	endoplasmic reticulum, extracellular, plasma membrane	56.4	51.07
KRH44035	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane	59.24	50.81
PGSC0003DMT400045270	Potato	endoplasmic reticulum, extracellular, plasma membrane	51.66	50.7
PGSC0003DMT400045273	Potato	endoplasmic reticulum, extracellular, plasma membrane	50.24	50.48
CDY38827	Canola	endoplasmic reticulum, extracellular, vacuole	55.92	49.58
PGSC0003DMT400045277	Potato	extracellular	50.24	49.53
Solyc06g060440.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	49.76	49.3
Bra016401.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	56.4	49.17
CDY08168	Canola	endoplasmic reticulum	38.39	49.09
Solyc06g060450.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	49.29	48.37
Solyc06g060430.1.1	Tomato	cytosol	18.96	43.48
GSMUA_Achr6P10010_001	Banana	nucleus, peroxisome, plasma membrane	61.14	40.57
TraesCS2A01G155600.1	Wheat	golgi	43.13	39.91
Bra017957.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	38.86	26.37

Protein Annotations

EnsemblPlants:TraesCS6A01G330200.1	EnsemblPlantsGene:TraesCS6A01G330200	InterPro:GOLD_dom	InterPro:IPR009038	InterPro:TMP21-related	ncoils:Coil
PANTHER:PTHR22811	PANTHER:PTHR22811:SF68	PFAM:PF01105	PFscan:PS50866	SEG:seg	SignalP:SignalP-noTM
SMART:SM01190	TMHMM:TMhelix	MapMan:22.3.5.2	:	:	:

Description

No Description!

Coordinates

chr6A:+:562930162..562932205

Molecular Weight (calculated)

23062.9 Da

IEP (calculated)

6.351

GRAVY (calculated)

0.187

Length

211 amino acids

Sequence
(BLAST)

001: MPAPAALALA AALLLAAASI CAEAVWLDMP QTGTKCVSEE IQANVVVLAD YALMYESHPS AHPTIAVKVT SPYGYTLHES GNITVGQFAF TTSEAGNFLA
101: CFWIDSAEKG SGVSVNLDWK TGIATKDWDA IAKKEKIEGV ELELRKLEVA VQSIHQNMVY LKAREAEMRE VSEKTNGRVA WFSIMSLGVC VVVSVLQLWH
201: LQGYFRKKKL I

Best Arabidopsis Sequence Match ( AT1G09580.1 )
(BLAST)

001: MKMTAKMRRE FPTAFLLLFL VPVMIPVGEA VWLDVPPTGT KCVSEEIQSN VVVLADYLII SEDHEVMPTI SVKVTSPYGN NLHNMENVTH GQFAFTTQES
101: GNYLACFWAD EKSHGNKNVS INIDWRTGIA AKDWASIAKK EKIEGVELEI RKLEGAVEAI HENILYLRNR EADMRTMSEK TNSRVAWYSI MSLGVCIAVS
201: GFQVLYLKQY FEKKKLI

Arabidopsis Description

Transmembrane emp24 domain-containing protein p24delta3 [Source:UniProtKB/Swiss-Prot;Acc:Q6IDL4]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.