Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 5
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P02320_001 | Banana | endoplasmic reticulum, plasma membrane | 87.5 | 87.5 |
| GSMUA_Achr3P20310_001 | Banana | plasma membrane | 80.09 | 80.09 |
| TraesCS7A01G169500.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 68.52 | 76.29 |
| TraesCS7D01G170400.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 67.59 | 75.26 |
| KRH48283 | Soybean | cytosol | 26.39 | 74.03 |
| Os06t0210100-01 | Rice | plastid | 68.52 | 70.81 |
| Zm00001d037163_P002 | Maize | extracellular, plasma membrane | 68.98 | 70.62 |
| EER88046 | Sorghum | endoplasmic reticulum | 68.52 | 69.16 |
| VIT_12s0034g01440.t01 | Wine grape | endoplasmic reticulum, extracellular | 68.98 | 68.98 |
| TraesCS7B01G074300.1 | Wheat | plasma membrane | 68.98 | 68.98 |
| Os02t0768200-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 68.98 | 68.35 |
| TraesCS6B01G361000.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 66.67 | 68.25 |
| TraesCS6D01G309100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 66.2 | 67.77 |
| TraesCS6A01G330200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 66.2 | 67.77 |
| EES07590 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 64.81 | 67.63 |
| KRH59179 | Soybean | endoplasmic reticulum | 65.28 | 66.82 |
| KRH53215 | Soybean | endoplasmic reticulum | 63.43 | 64.62 |
| KRH18772 | Soybean | plasma membrane | 63.89 | 64.19 |
| Zm00001d005857_P001 | Maize | cytosol, golgi | 47.69 | 63.98 |
| KRH16308 | Soybean | endoplasmic reticulum | 63.43 | 63.72 |
| Solyc10g045640.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 62.96 | 63.55 |
| KRH64707 | Soybean | plasma membrane | 62.96 | 63.26 |
| Zm00001d018194_P001 | Maize | extracellular | 48.61 | 62.5 |
| PGSC0003DMT400002378 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 60.19 | 61.9 |
| Solyc11g013000.1.1 | Tomato | plastid | 60.19 | 61.9 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane, vacuole | 62.5 | 61.64 |
| Solyc01g104220.2.1 | Tomato | endoplasmic reticulum | 60.19 | 61.32 |
| KRH43057 | Soybean | extracellular | 43.98 | 60.9 |
| AT1G21900.1 | Thale cress | plasma membrane | 60.65 | 60.65 |
| AT1G09580.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 60.65 | 60.37 |
| CDX95293 | Canola | endoplasmic reticulum, extracellular, golgi | 60.19 | 60.19 |
| CDY39938 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 60.19 | 60.19 |
| Bra027911.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 60.19 | 60.19 |
| EER96837 | Sorghum | extracellular | 57.87 | 60.1 |
| CDY04681 | Canola | endoplasmic reticulum | 58.33 | 60.0 |
| PGSC0003DMT400061146 | Potato | extracellular | 58.33 | 60.0 |
| CDY31789 | Canola | plasma membrane | 59.72 | 60.0 |
| AT1G57620.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 58.8 | 59.91 |
| Bra020010.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi | 58.8 | 59.91 |
| KRH10436 | Soybean | endoplasmic reticulum | 59.26 | 59.53 |
| Bra030786.1-P | Field mustard | extracellular | 57.87 | 59.24 |
| Bra038147.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 58.8 | 59.07 |
| Os09t0453200-00 | Rice | endoplasmic reticulum, plasma membrane | 57.87 | 58.96 |
| CDY23801 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 58.33 | 58.6 |
| TraesCS5A01G235500.1 | Wheat | extracellular, vacuole | 56.94 | 58.57 |
| VIT_18s0001g03200.t01 | Wine grape | endoplasmic reticulum | 54.63 | 58.13 |
| TraesCS5D01G242600.1 | Wheat | endoplasmic reticulum | 56.02 | 57.62 |
| TraesCS5B01G233900.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 55.56 | 57.42 |
| CDX93498 | Canola | endoplasmic reticulum, golgi, plasma membrane | 58.8 | 56.7 |
| CDY50894 | Canola | endoplasmic reticulum, golgi, plasma membrane | 58.33 | 56.25 |
| CDX96570 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 60.65 | 56.22 |
| HORVU7Hr1G035390.1 | Barley | mitochondrion, plastid | 70.83 | 55.84 |
| CDY31078 | Canola | endoplasmic reticulum | 57.87 | 55.8 |
| CDY20688 | Canola | endoplasmic reticulum, golgi, nucleus | 57.87 | 55.8 |
| CDY38827 | Canola | endoplasmic reticulum, extracellular, vacuole | 61.11 | 55.46 |
| PGSC0003DMT400045270 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 55.09 | 55.35 |
| PGSC0003DMT400045273 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 53.24 | 54.76 |
| Bra016401.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 60.65 | 54.13 |
| HORVU5Hr1G067730.1 | Barley | cytosol, peroxisome | 55.56 | 53.33 |
| PGSC0003DMT400045277 | Potato | extracellular | 52.78 | 53.27 |
| KRH44035 | Soybean | endoplasmic reticulum, mitochondrion, plasma membrane | 60.19 | 52.85 |
| Solyc06g060440.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 51.39 | 52.11 |
| Solyc06g060450.2.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 50.46 | 50.7 |
| Os08t0469400-00 | Rice | endoplasmic reticulum, extracellular, vacuole | 31.02 | 48.91 |
| CDY08168 | Canola | endoplasmic reticulum | 37.04 | 48.48 |
| Solyc06g060430.1.1 | Tomato | cytosol | 20.37 | 47.83 |
| GSMUA_AchrUn_... | Banana | cytosol | 35.65 | 45.56 |
| GSMUA_Achr1P21760_001 | Banana | cytosol | 35.19 | 44.97 |
| GSMUA_Achr6P10010_001 | Banana | nucleus, peroxisome, plasma membrane | 65.74 | 44.65 |
| KXG25366 | Sorghum | plasma membrane | 50.46 | 43.6 |
| GSMUA_Achr6P08610_001 | Banana | endoplasmic reticulum, plasma membrane | 37.5 | 37.85 |
| Bra017957.1-P | Field mustard | endoplasmic reticulum, golgi, vacuole | 39.35 | 27.33 |
Protein Annotations
| MapMan:22.3.5.2 | ncoils:Coil | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0005789 | GO:GO:0016020 | GO:GO:0016021 | InterPro:GOLD_dom | EnsemblPlantsGene:GSMUA_AchrUn_randomG08620_001 |
| EnsemblPlants:GSMUA_AchrUn_randomP08620_001 | EnsemblPlants:GSMUA_AchrUn_randomT08620_001 | InterPro:IPR009038 | UniProt:M0U7H2 | PFAM:PF01105 | PFscan:PS50866 |
| PANTHER:PTHR22811 | PANTHER:PTHR22811:SF68 | SMART:SM01190 | SignalP:SignalP-TM | InterPro:TMP21-related | TMHMM:TMhelix |
| UniParc:UPI00029630A2 | : | : | : | : | : |
Description
Putative Transmembrane emp24 domain-containing protein 10 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG08620_001]
Coordinates
chrchrUn_random:-:39693052..39705738
Molecular Weight (calculated)
23620.8 Da
IEP (calculated)
7.112
GRAVY (calculated)
0.200
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLRDAVIRR PAVVALLLCN MLLAPGVTAV WLNLPASGTK CVSEEIQPNV VVLADYAVVH EGEADGLPII SAKVTSPYGN TLHHKEHVTA GQFAFTTTEA
101: GNYLACFWID SGDKGVGASV SLDWKIGIAA KDWDSVAKKD KIEGVELELT KLEAAVQAIH ANLLYLKSRE AEMREVSERT NARVAWFSIM SLGVCIVVSM
201: LQLWHLKGYF QKKKLI
101: GNYLACFWID SGDKGVGASV SLDWKIGIAA KDWDSVAKKD KIEGVELELT KLEAAVQAIH ANLLYLKSRE AEMREVSERT NARVAWFSIM SLGVCIVVSM
201: LQLWHLKGYF QKKKLI
001: MKMTAKMRRE FPTAFLLLFL VPVMIPVGEA VWLDVPPTGT KCVSEEIQSN VVVLADYLII SEDHEVMPTI SVKVTSPYGN NLHNMENVTH GQFAFTTQES
101: GNYLACFWAD EKSHGNKNVS INIDWRTGIA AKDWASIAKK EKIEGVELEI RKLEGAVEAI HENILYLRNR EADMRTMSEK TNSRVAWYSI MSLGVCIAVS
201: GFQVLYLKQY FEKKKLI
101: GNYLACFWAD EKSHGNKNVS INIDWRTGIA AKDWASIAKK EKIEGVELEI RKLEGAVEAI HENILYLRNR EADMRTMSEK TNSRVAWYSI MSLGVCIAVS
201: GFQVLYLKQY FEKKKLI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta3 [Source:UniProtKB/Swiss-Prot;Acc:Q6IDL4]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.