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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 5
  • golgi 6
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, vacuole
Any Predictor:cytosol, secretory
BaCelLo:secretory
EpiLoc:cytosol
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY04681 Canola endoplasmic reticulum 45.34 67.14
CDY08168 Canola endoplasmic reticulum 34.08 64.24
AT1G21900.1 Thale cress plasma membrane 39.87 57.41
Bra016401.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 39.23 50.41
Zm00001d018194_P001 Maize extracellular 23.15 42.86
KRH53215 Soybean endoplasmic reticulum 28.94 42.45
KRH64707 Soybean plasma membrane 28.94 41.86
TraesCS7D01G170400.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 26.05 41.75
EES07590 Sorghum endoplasmic reticulum, extracellular, vacuole 27.65 41.55
Solyc11g013000.1.1 Tomato plastid 27.97 41.43
TraesCS7A01G169500.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 25.72 41.24
PGSC0003DMT400002378 Potato endoplasmic reticulum, extracellular, plasma membrane 27.65 40.95
Bra030786.1-P Field mustard extracellular 27.65 40.76
Os06t0210100-01 Rice plastid 27.33 40.67
Bra027911.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 27.65 39.81
GSMUA_Achr6P02320_001 Banana endoplasmic reticulum, plasma membrane 27.33 39.35
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, plasma membrane 27.33 39.35
TraesCS6B01G361000.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 26.69 39.34
Zm00001d037163_P002 Maize extracellular, plasma membrane 26.69 39.34
EER88046 Sorghum endoplasmic reticulum 27.01 39.25
TraesCS6A01G330200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 26.37 38.86
TraesCS6D01G309100.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 26.37 38.86
KRH18772 Soybean plasma membrane 26.69 38.6
Os02t0768200-01 Rice endoplasmic reticulum, plasma membrane, vacuole 27.01 38.53
Bra038147.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 26.37 38.14
TraesCS7B01G074300.1 Wheat plasma membrane 26.37 37.96
Bra020010.1-P Field mustard endoplasmic reticulum, extracellular, golgi 25.72 37.74
KRH16308 Soybean endoplasmic reticulum 26.05 37.67
GSMUA_Achr3P20310_001 Banana plasma membrane 25.72 37.04
PGSC0003DMT400045277 Potato extracellular 25.4 36.92
TraesCS5A01G235500.1 Wheat extracellular, vacuole 24.76 36.67
VIT_18s0001g03200.t01 Wine grape endoplasmic reticulum 23.79 36.45
TraesCS5B01G233900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 24.44 36.36
Os09t0453200-00 Rice endoplasmic reticulum, plasma membrane 24.76 36.32
TraesCS5D01G242600.1 Wheat endoplasmic reticulum 24.44 36.19
EER96837 Sorghum extracellular 24.12 36.06
Solyc06g060450.2.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 24.44 35.35
PGSC0003DMT400045273 Potato endoplasmic reticulum, extracellular, plasma membrane 23.79 35.24
Solyc06g060440.1.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 24.12 35.21
Os08t0469400-00 Rice endoplasmic reticulum, extracellular, vacuole 15.43 35.04
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, vacuole 24.44 34.7
PGSC0003DMT400045270 Potato endoplasmic reticulum, extracellular, plasma membrane 23.15 33.49
Bra029868.1-P Field mustard plasma membrane 22.51 33.33
HORVU5Hr1G067730.1 Barley cytosol, peroxisome 24.12 33.33
Bra001380.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 22.83 32.72
HORVU7Hr1G035390.1 Barley mitochondrion, plastid 26.37 29.93
Bra034146.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 18.65 29.44
Zm00001d005857_P001 Maize cytosol, golgi 14.79 28.57
KXG25366 Sorghum plasma membrane 22.83 28.4
Bra026866.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 17.04 25.0
Bra024694.1-P Field mustard endoplasmic reticulum, plasma membrane 17.04 24.77
Bra026559.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 17.04 24.54
Solyc06g060430.1.1 Tomato cytosol 7.07 23.91
Bra016715.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 15.43 23.88
Bra036221.1-P Field mustard endoplasmic reticulum, extracellular 16.4 23.61
GSMUA_Achr6P10010_001 Banana nucleus, peroxisome, plasma membrane 24.12 23.58
Bra033081.1-P Field mustard golgi, plasma membrane, plastid 16.08 22.52
Bra024781.1-P Field mustard endoplasmic reticulum, extracellular 15.11 21.96
Bra016283.1-P Field mustard endoplasmic reticulum 15.11 21.96
Bra004382.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 15.11 21.86
Protein Annotations
MapMan:35.1EnsemblPlantsGene:Bra017957EnsemblPlants:Bra017957.1EnsemblPlants:Bra017957.1-PGO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020GO:GO:0016021
InterPro:GOLD_domInterPro:IPR009038UniProt:M4DN70PFAM:PF01105PANTHER:PTHR22811PANTHER:PTHR22811:SF76
SMART:SM01190SignalP:SignalP-noTMInterPro:TMP21-relatedTMHMM:TMhelixUniParc:UPI000253F14CSEG:seg
Description
AT1G21900 (E=2e-034) | emp24/gp25L/p24 family protein
Coordinates
chrA06:-:9066724..9069553
Molecular Weight (calculated)
34298.0 Da
IEP (calculated)
8.459
GRAVY (calculated)
-0.280
Length
311 amino acids
Sequence
(BLAST)
001: MSIRGGLVAF SPILAALLFM LTVNHGEAIW LTIPPTGGTK CVSEEIQSNV VVLADYYVVD EHSPENTPAI SSKETSPYGN NLYHQDNVTH ANPLTLGIDW
101: KIGIAAKDWD FVAKRKKSRQ GVELQLRRLD GLMQSIRENI KYIKDREAEM REVKEHQDLL VADLLSRETK KWNVVTINNL LLEPINYILC LRPSILDAED
201: KECSKAEVKP ATDVKNVTAT RTTTSTATAT APATATATAP EIISGLKSAS SRKFRPVCHH CGVVGYIRLR SVQGANHGGF GLNNMWSRRF NHYGDGGMGF
301: PPHFGGYGSS Y
Best Arabidopsis Sequence Match ( AT1G21900.1 )
(BLAST)
001: MAINRIAHGS LFLTVVLFFL TVNYGEAIWL TIPTTGGTKC VSEEIQSNVV VLADYYVVDE HNPENTPAVS SKVTSPYGNN LHHQENVTHG QFAFTTQEAG
101: NYLACFWIDS SHHLANPITL GVDWKMGIAA KDWDSVAKKE KIEGVELQLR RLEGLVLSIR ENLNYIKDRE AEMREVSETT NSRVAWFSIM SLGVCVVVVG
201: SQILYLKRYF HKKKLI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta5 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWM6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.