Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 7
- vacuole 6
- plasma membrane 6
- golgi 5
- mitochondrion 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d037163_P002 | Maize | extracellular, plasma membrane | 95.79 | 97.16 |
| Os06t0210100-01 | Rice | plastid | 86.45 | 88.52 |
| TraesCS7D01G170400.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 78.5 | 86.6 |
| TraesCS7A01G169500.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 78.04 | 86.08 |
| TraesCS7B01G074300.1 | Wheat | plasma membrane | 81.78 | 81.02 |
| EES07590 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 77.1 | 79.71 |
| KRH48283 | Soybean | cytosol | 26.17 | 72.73 |
| GSMUA_Achr6P02320_001 | Banana | endoplasmic reticulum, plasma membrane | 70.56 | 69.91 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 69.16 | 68.52 |
| KRH59179 | Soybean | endoplasmic reticulum | 66.36 | 67.3 |
| VIT_12s0034g01440.t01 | Wine grape | endoplasmic reticulum, extracellular | 67.76 | 67.13 |
| EER96837 | Sorghum | extracellular | 64.02 | 65.87 |
| GSMUA_Achr3P20310_001 | Banana | plasma membrane | 64.95 | 64.35 |
| HORVU7Hr1G035390.1 | Barley | mitochondrion, plastid | 80.84 | 63.14 |
| AT1G09580.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 63.55 | 62.67 |
| Bra027911.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 62.62 | 62.04 |
| CDX95293 | Canola | endoplasmic reticulum, extracellular, golgi | 62.62 | 62.04 |
| CDY39938 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 62.62 | 62.04 |
| KRH18772 | Soybean | plasma membrane | 62.15 | 61.86 |
| Solyc10g045640.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 61.68 | 61.68 |
| KRH43057 | Soybean | extracellular | 44.86 | 61.54 |
| CDY31789 | Canola | plasma membrane | 61.68 | 61.4 |
| KRH16308 | Soybean | endoplasmic reticulum | 61.68 | 61.4 |
| AT1G21900.1 | Thale cress | plasma membrane | 61.68 | 61.11 |
| AT1G57620.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 60.28 | 60.85 |
| Bra038147.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 60.75 | 60.47 |
| Bra020010.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi | 59.81 | 60.38 |
| PGSC0003DMT400061146 | Potato | extracellular | 58.88 | 60.0 |
| CDY23801 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 60.28 | 60.0 |
| KRH53215 | Soybean | endoplasmic reticulum | 59.35 | 59.91 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane, vacuole | 61.22 | 59.82 |
| KRH64707 | Soybean | plasma membrane | 59.81 | 59.53 |
| Solyc01g104220.2.1 | Tomato | endoplasmic reticulum | 58.88 | 59.43 |
| Bra030786.1-P | Field mustard | extracellular | 58.41 | 59.24 |
| VIT_18s0001g03200.t01 | Wine grape | endoplasmic reticulum | 56.07 | 59.11 |
| Solyc11g013000.1.1 | Tomato | plastid | 57.94 | 59.05 |
| PGSC0003DMT400002378 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 57.94 | 59.05 |
| KRH10436 | Soybean | endoplasmic reticulum | 57.94 | 57.67 |
| CDY04681 | Canola | endoplasmic reticulum | 56.07 | 57.14 |
| CDY50894 | Canola | endoplasmic reticulum, golgi, plasma membrane | 59.81 | 57.14 |
| CDX93498 | Canola | endoplasmic reticulum, golgi, plasma membrane | 59.81 | 57.14 |
| CDY20688 | Canola | endoplasmic reticulum, golgi, nucleus | 58.88 | 56.25 |
| CDY31078 | Canola | endoplasmic reticulum | 57.94 | 55.36 |
| PGSC0003DMT400045270 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 53.74 | 53.49 |
| KRH44035 | Soybean | endoplasmic reticulum, mitochondrion, plasma membrane | 59.35 | 51.63 |
| PGSC0003DMT400045273 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 50.47 | 51.43 |
| CDX96570 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 55.61 | 51.07 |
| CDY38827 | Canola | endoplasmic reticulum, extracellular, vacuole | 55.14 | 49.58 |
| PGSC0003DMT400045277 | Potato | extracellular | 49.53 | 49.53 |
| Solyc06g060440.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 49.07 | 49.3 |
| Bra016401.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 55.61 | 49.17 |
| Solyc06g060450.2.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 49.07 | 48.84 |
| CDY08168 | Canola | endoplasmic reticulum | 36.92 | 47.88 |
| KXG25366 | Sorghum | plasma membrane | 53.74 | 46.0 |
| Solyc06g060430.1.1 | Tomato | cytosol | 19.16 | 44.57 |
| EER92205 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 42.99 | 42.99 |
| EER97600 | Sorghum | mitochondrion | 44.86 | 41.92 |
| GSMUA_Achr6P10010_001 | Banana | nucleus, peroxisome, plasma membrane | 60.28 | 40.57 |
| Bra017957.1-P | Field mustard | endoplasmic reticulum, golgi, vacuole | 39.25 | 27.01 |
| OQU92664 | Sorghum | extracellular | 26.17 | 22.76 |
| OQU80774 | Sorghum | cytosol, plastid | 18.69 | 18.18 |
| OQU86595 | Sorghum | cytosol | 16.36 | 14.34 |
Protein Annotations
| MapMan:22.3.5.2 | EntrezGene:8077343 | UniProt:C5Z6F2 | ncoils:Coil | EnsemblPlants:EER88046 | ProteinID:EER88046 |
| ProteinID:EER88046.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 |
| GO:GO:0005789 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | InterPro:GOLD_dom |
| InterPro:IPR009038 | PFAM:PF01105 | PFscan:PS50866 | PANTHER:PTHR22811 | PANTHER:PTHR22811:SF68 | SMART:SM01190 |
| EnsemblPlantsGene:SORBI_3010G080200 | unigene:Sbi.5824 | SignalP:SignalP-noTM | InterPro:TMP21-related | TMHMM:TMhelix | UniParc:UPI0001A892E5 |
| RefSeq:XP_002436679.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:6837209..6840401
Molecular Weight (calculated)
23437.3 Da
IEP (calculated)
6.627
GRAVY (calculated)
0.178
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASVFPALL LAVAAAAALL LLPAAEAVWL ELPPSGTKCV SEEIQPNVVV LADYSIMYES HPSSHPTVAV KVTSPYGNTV HHNENATMGQ FAFTTSEAGN
101: YLACFWIDSV EKGSGTSLNL DWKIGIAAKD WDTIAKKEKI EGVELELRKL EAAVESIHHN LLYLKAREAE MRTVSEKTNS RVAWFSILSL GVCVAVSVLQ
201: LWHLQGFFRK KKLI
101: YLACFWIDSV EKGSGTSLNL DWKIGIAAKD WDTIAKKEKI EGVELELRKL EAAVESIHHN LLYLKAREAE MRTVSEKTNS RVAWFSILSL GVCVAVSVLQ
201: LWHLQGFFRK KKLI
001: MKMTAKMRRE FPTAFLLLFL VPVMIPVGEA VWLDVPPTGT KCVSEEIQSN VVVLADYLII SEDHEVMPTI SVKVTSPYGN NLHNMENVTH GQFAFTTQES
101: GNYLACFWAD EKSHGNKNVS INIDWRTGIA AKDWASIAKK EKIEGVELEI RKLEGAVEAI HENILYLRNR EADMRTMSEK TNSRVAWYSI MSLGVCIAVS
201: GFQVLYLKQY FEKKKLI
101: GNYLACFWAD EKSHGNKNVS INIDWRTGIA AKDWASIAKK EKIEGVELEI RKLEGAVEAI HENILYLRNR EADMRTMSEK TNSRVAWYSI MSLGVCIAVS
201: GFQVLYLKQY FEKKKLI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta3 [Source:UniProtKB/Swiss-Prot;Acc:Q6IDL4]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.