Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX96570 Canola endoplasmic reticulum, extracellular, plasma membrane 95.87 99.57
CDY38827 Canola endoplasmic reticulum, extracellular, vacuole 92.56 94.12
AT1G21900.1 Thale cress plasma membrane 71.9 80.56
KRH53215 Soybean endoplasmic reticulum 55.37 63.21
Solyc11g013000.1.1 Tomato plastid 53.72 61.9
GSMUA_Achr6P02320_001 Banana endoplasmic reticulum, plasma membrane 54.96 61.57
KRH64707 Soybean plasma membrane 54.55 61.4
TraesCS7D01G170400.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 48.76 60.82
TraesCS7A01G169500.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 48.76 60.82
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, plasma membrane 54.13 60.65
PGSC0003DMT400002378 Potato endoplasmic reticulum, extracellular, plasma membrane 52.48 60.48
KRH18772 Soybean plasma membrane 52.07 58.6
Os06t0210100-01 Rice plastid 50.41 58.37
Bra027911.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 52.07 58.33
KRH16308 Soybean endoplasmic reticulum 51.65 58.14
Bra038147.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 50.83 57.21
Bra020010.1-P Field mustard endoplasmic reticulum, extracellular, golgi 50.0 57.08
EES07590 Sorghum endoplasmic reticulum, extracellular, vacuole 48.76 57.0
TraesCS6B01G361000.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 49.59 56.87
TraesCS6D01G309100.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 49.59 56.87
Bra030786.1-P Field mustard extracellular 49.59 56.87
TraesCS6A01G330200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 49.17 56.4
GSMUA_Achr3P20310_001 Banana plasma membrane 50.0 56.02
Zm00001d037163_P002 Maize extracellular, plasma membrane 48.76 55.92
EER88046 Sorghum endoplasmic reticulum 49.17 55.61
Os02t0768200-01 Rice endoplasmic reticulum, plasma membrane, vacuole 50.0 55.5
TraesCS7B01G074300.1 Wheat plasma membrane 49.17 55.09
PGSC0003DMT400045273 Potato endoplasmic reticulum, extracellular, plasma membrane 47.52 54.76
TraesCS5B01G233900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 47.11 54.55
Zm00001d018194_P001 Maize extracellular 37.6 54.17
TraesCS5D01G242600.1 Wheat endoplasmic reticulum 46.69 53.81
TraesCS5A01G235500.1 Wheat extracellular, vacuole 46.69 53.81
PGSC0003DMT400045277 Potato extracellular 47.52 53.74
VIT_18s0001g03200.t01 Wine grape endoplasmic reticulum 45.04 53.69
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, vacuole 47.93 52.97
Os09t0453200-00 Rice endoplasmic reticulum, plasma membrane 46.28 52.83
PGSC0003DMT400045270 Potato endoplasmic reticulum, extracellular, plasma membrane 46.69 52.56
Solyc06g060440.1.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 45.87 52.11
Solyc06g060450.2.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 46.28 52.09
EER96837 Sorghum extracellular 44.21 51.44
Zm00001d005857_P001 Maize cytosol, golgi 33.88 50.93
HORVU5Hr1G067730.1 Barley cytosol, peroxisome 45.87 49.33
Os08t0469400-00 Rice endoplasmic reticulum, extracellular, vacuole 26.86 47.45
Bra001380.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 41.74 46.54
Solyc06g060430.1.1 Tomato cytosol 17.36 45.65
Bra029868.1-P Field mustard plasma membrane 39.26 45.24
Bra034146.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 36.36 44.67
HORVU7Hr1G035390.1 Barley mitochondrion, plastid 49.59 43.8
KXG25366 Sorghum plasma membrane 41.74 40.4
Bra026866.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 34.71 39.62
Bra017957.1-P Field mustard endoplasmic reticulum, golgi, vacuole 50.41 39.23
Bra024694.1-P Field mustard endoplasmic reticulum, plasma membrane 33.47 37.85
Bra004382.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 31.82 35.81
Bra026559.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 31.82 35.65
Bra024781.1-P Field mustard endoplasmic reticulum, extracellular 30.99 35.05
GSMUA_Achr6P10010_001 Banana nucleus, peroxisome, plasma membrane 45.45 34.59
Bra016283.1-P Field mustard endoplasmic reticulum 30.58 34.58
Bra036221.1-P Field mustard endoplasmic reticulum, extracellular 28.93 32.41
Bra033081.1-P Field mustard golgi, plasma membrane, plastid 29.34 31.98
Bra016715.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 24.79 29.85
Protein Annotations
MapMan:22.3.5.2EnsemblPlantsGene:Bra016401EnsemblPlants:Bra016401.1EnsemblPlants:Bra016401.1-Pncoils:CoilGO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020
GO:GO:0016021InterPro:GOLD_domInterPro:IPR009038UniProt:M4DIS4PFAM:PF01105PFscan:PS50866
PANTHER:PTHR22811PANTHER:PTHR22811:SF76SMART:SM01190SignalP:SignalP-noTMInterPro:TMP21-relatedTMHMM:TMhelix
UniParc:UPI00025467A9:::::
Description
AT1G21900 (E=4e-064) | emp24/gp25L/p24 family protein
Coordinates
chrA08:+:18283456..18284388
Molecular Weight (calculated)
27082.6 Da
IEP (calculated)
6.234
GRAVY (calculated)
0.110
Length
242 amino acids
Sequence
(BLAST)
001: MAIRGIFTIS TVVLFLLTVN HGEAIWLTIP ATGGTKCVSE EIQSNVVVMA DYYVVDEQNP GNTPAVSAKV TSPYGNDLHH QDNVTHGQFA FTTQETGNYL
101: ACFSVDSSHP LPNPLTLGID WKTGIAAKDW DSVAKKEKIE ASYIYINISS LFFFVMCCYI VMNVYCFLQG VELQLTRLEG LVQAIRENID YIKNREGEMR
201: EVSEATNARV AWFSIMSLGV CLSAAGAQIW YLKRYFHKKK LI
Best Arabidopsis Sequence Match ( AT1G21900.1 )
(BLAST)
001: MAINRIAHGS LFLTVVLFFL TVNYGEAIWL TIPTTGGTKC VSEEIQSNVV VLADYYVVDE HNPENTPAVS SKVTSPYGNN LHHQENVTHG QFAFTTQEAG
101: NYLACFWIDS SHHLANPITL GVDWKMGIAA KDWDSVAKKE KIEGVELQLR RLEGLVLSIR ENLNYIKDRE AEMREVSETT NSRVAWFSIM SLGVCVVVVG
201: SQILYLKRYF HKKKLI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta5 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWM6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.