Factsheet for TraesCS5D01G242600.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 6
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G233900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	96.19	96.65
TraesCS5A01G235500.1	Wheat	extracellular, vacuole	96.19	96.19
HORVU5Hr1G067730.1	Barley	cytosol, peroxisome	91.43	85.33
EER96837	Sorghum	extracellular	72.86	73.56
Os09t0453200-00	Rice	endoplasmic reticulum, plasma membrane	73.33	72.64
Zm00001d005857_P001	Maize	cytosol, golgi	49.52	64.6
TraesCS7D01G170400.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	59.52	64.43
TraesCS6D01G309100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	60.48	60.19
GSMUA_Achr6P02320_001	Banana	endoplasmic reticulum, plasma membrane	59.05	57.41
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, plasma membrane	57.62	56.02
KRH48283	Soybean	cytosol	20.48	55.84
VIT_12s0034g01440.t01	Wine grape	endoplasmic reticulum, extracellular	57.14	55.56
KRH59179	Soybean	endoplasmic reticulum	54.76	54.5
Solyc10g045640.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	55.24	54.21
Solyc11g013000.1.1	Tomato	plastid	53.33	53.33
CDY04681	Canola	endoplasmic reticulum	53.33	53.33
Bra020010.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	53.81	53.3
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, vacuole	55.24	52.97
Solyc01g104220.2.1	Tomato	endoplasmic reticulum	53.33	52.83
KRH10436	Soybean	endoplasmic reticulum	53.81	52.56
AT1G09580.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	54.29	52.53
CDY39938	Canola	endoplasmic reticulum, extracellular, plasma membrane	53.81	52.31
Bra027911.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	53.81	52.31
GSMUA_Achr3P20310_001	Banana	plasma membrane	53.81	52.31
CDY31789	Canola	plasma membrane	53.33	52.09
PGSC0003DMT400002378	Potato	endoplasmic reticulum, extracellular, plasma membrane	51.9	51.9
PGSC0003DMT400061146	Potato	extracellular	51.9	51.9
CDX95293	Canola	endoplasmic reticulum, extracellular, golgi	53.33	51.85
AT1G21900.1	Thale cress	plasma membrane	53.33	51.85
Bra038147.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	52.86	51.63
CDY23801	Canola	endoplasmic reticulum, extracellular, plasma membrane	52.38	51.16
KRH16308	Soybean	endoplasmic reticulum	52.38	51.16
KRH18772	Soybean	plasma membrane	52.38	51.16
AT1G57620.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	51.43	50.94
Bra030786.1-P	Field mustard	extracellular	50.95	50.71
CDX93498	Canola	endoplasmic reticulum, golgi, plasma membrane	53.81	50.45
CDY50894	Canola	endoplasmic reticulum, golgi, plasma membrane	53.81	50.45
VIT_18s0001g03200.t01	Wine grape	endoplasmic reticulum	48.57	50.25
PGSC0003DMT400045270	Potato	endoplasmic reticulum, extracellular, plasma membrane	51.43	50.23
Solyc06g060430.1.1	Tomato	cytosol	21.9	50.0
KRH43057	Soybean	extracellular	36.67	49.36
KRH53215	Soybean	endoplasmic reticulum	49.52	49.06
KRH64707	Soybean	plasma membrane	50.0	48.84
CDX96570	Canola	endoplasmic reticulum, extracellular, plasma membrane	53.81	48.5
CDY31078	Canola	endoplasmic reticulum	50.95	47.77
CDY20688	Canola	endoplasmic reticulum, golgi, nucleus	50.95	47.77
PGSC0003DMT400045273	Potato	endoplasmic reticulum, extracellular, plasma membrane	47.62	47.62
CDY38827	Canola	endoplasmic reticulum, extracellular, vacuole	53.81	47.48
KRH44035	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane	54.76	46.75
Bra016401.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	53.81	46.69
PGSC0003DMT400045277	Potato	extracellular	47.14	46.26
CDY08168	Canola	endoplasmic reticulum	35.71	45.45
Solyc06g060440.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	45.71	45.07
Solyc06g060450.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	45.71	44.65
GSMUA_Achr6P10010_001	Banana	nucleus, peroxisome, plasma membrane	55.24	36.48
TraesCS2D01G161400.1	Wheat	endoplasmic reticulum, plastid	37.62	34.65
Bra017957.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	36.19	24.44

Protein Annotations

EnsemblPlants:TraesCS5D01G242600.1	EnsemblPlantsGene:TraesCS5D01G242600	InterPro:GOLD_dom	InterPro:IPR009038	InterPro:TMP21-related	PANTHER:PTHR22811
PANTHER:PTHR22811:SF73	PFAM:PF01105	PFscan:PS50866	SEG:seg	SignalP:SignalP-noTM	SMART:SM01190
TMHMM:TMhelix	MapMan:22.3.5.2	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:350996222..350998549

Molecular Weight (calculated)

23239.3 Da

IEP (calculated)

7.957

GRAVY (calculated)

0.147

Length

210 amino acids

Sequence
(BLAST)

001: MARGGAWAVA AAAVLWWMAA GAGAVWLEIA PSGTKCVAEE IRSNVVVIGD YSVLYEHQQA HPTVSVKITS PFGDTIHKKD KATVDQFAFT TSEAGNYLAC
101: FTVDSDNKGL VVKLNLDWKI GIAAKDWDAI AKKEKIEGVA LELFKLDESV QTIYENLLVL RTKESDMRDV SEVTNARVLW LSMMSLGVCI CVSVMQLVHL
201: KRYFRKKKLI

Best Arabidopsis Sequence Match ( AT1G09580.1 )
(BLAST)

001: MKMTAKMRRE FPTAFLLLFL VPVMIPVGEA VWLDVPPTGT KCVSEEIQSN VVVLADYLII SEDHEVMPTI SVKVTSPYGN NLHNMENVTH GQFAFTTQES
101: GNYLACFWAD EKSHGNKNVS INIDWRTGIA AKDWASIAKK EKIEGVELEI RKLEGAVEAI HENILYLRNR EADMRTMSEK TNSRVAWYSI MSLGVCIAVS
201: GFQVLYLKQY FEKKKLI

Arabidopsis Description

Transmembrane emp24 domain-containing protein p24delta3 [Source:UniProtKB/Swiss-Prot;Acc:Q6IDL4]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.