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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, golgi
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:golgi
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra027911.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 97.22 97.22
CDY39938 Canola endoplasmic reticulum, extracellular, plasma membrane 97.22 97.22
CDY23801 Canola endoplasmic reticulum, extracellular, plasma membrane 89.35 89.77
CDY31789 Canola plasma membrane 89.35 89.77
AT1G57620.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 80.09 81.6
KRH48283 Soybean cytosol 26.39 74.03
VIT_12s0034g01440.t01 Wine grape endoplasmic reticulum, extracellular 67.59 67.59
TraesCS7A01G169500.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 60.65 67.53
TraesCS7D01G170400.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 60.19 67.01
CDY31078 Canola endoplasmic reticulum 68.98 66.52
CDY20688 Canola endoplasmic reticulum, golgi, nucleus 68.52 66.07
KRH59179 Soybean endoplasmic reticulum 63.89 65.4
CDX93498 Canola endoplasmic reticulum, golgi, plasma membrane 67.13 64.73
Os06t0210100-01 Rice plastid 62.5 64.59
Solyc10g045640.1.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 63.43 64.02
CDY50894 Canola endoplasmic reticulum, golgi, plasma membrane 66.2 63.84
Zm00001d037163_P002 Maize extracellular, plasma membrane 61.57 63.03
EER88046 Sorghum endoplasmic reticulum 62.04 62.62
Solyc01g104220.2.1 Tomato endoplasmic reticulum 61.11 62.26
TraesCS6A01G330200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 60.19 61.61
TraesCS6B01G361000.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 60.19 61.61
GSMUA_Achr6P02320_001 Banana endoplasmic reticulum, plasma membrane 61.57 61.57
EES07590 Sorghum endoplasmic reticulum, extracellular, vacuole 58.8 61.35
TraesCS6D01G309100.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 59.72 61.14
Os02t0768200-01 Rice endoplasmic reticulum, plasma membrane, vacuole 61.11 60.55
CDY04681 Canola endoplasmic reticulum 58.8 60.48
PGSC0003DMT400061146 Potato extracellular 58.8 60.48
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, plasma membrane 60.19 60.19
TraesCS7B01G074300.1 Wheat plasma membrane 59.72 59.72
KRH43057 Soybean extracellular 42.59 58.97
KRH10436 Soybean endoplasmic reticulum 57.87 58.14
Zm00001d018194_P001 Maize extracellular 44.91 57.74
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, vacuole 57.41 56.62
GSMUA_Achr3P20310_001 Banana plasma membrane 56.48 56.48
Zm00001d005857_P001 Maize cytosol, golgi 41.2 55.28
Os09t0453200-00 Rice endoplasmic reticulum, plasma membrane 53.7 54.72
CDX96570 Canola endoplasmic reticulum, extracellular, plasma membrane 58.33 54.08
TraesCS5B01G233900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 52.31 54.07
EER96837 Sorghum extracellular 51.85 53.85
TraesCS5A01G235500.1 Wheat extracellular, vacuole 51.85 53.33
TraesCS5D01G242600.1 Wheat endoplasmic reticulum 51.85 53.33
CDY38827 Canola endoplasmic reticulum, extracellular, vacuole 57.87 52.52
KRH44035 Soybean endoplasmic reticulum, mitochondrion, plasma membrane 59.26 52.03
CDY37184 Canola endoplasmic reticulum, peroxisome, plastid 12.04 52.0
HORVU5Hr1G067730.1 Barley cytosol, peroxisome 51.85 49.78
CDY08168 Canola endoplasmic reticulum 37.96 49.7
CDY00971 Canola plasma membrane 46.76 48.1
CDY08577 Canola plasma membrane 46.76 48.1
CDX73903 Canola endoplasmic reticulum, extracellular, plasma membrane 45.83 47.6
CDX73906 Canola endoplasmic reticulum, extracellular, plasma membrane 45.83 47.6
HORVU7Hr1G035390.1 Barley mitochondrion, plastid 60.19 47.45
CDY00701 Canola plasma membrane 44.44 46.15
Os08t0469400-00 Rice endoplasmic reticulum, extracellular, vacuole 28.7 45.26
KXG25366 Sorghum plasma membrane 52.31 45.2
CDY36275 Canola endoplasmic reticulum, extracellular, plasma membrane 40.74 44.67
CDY16181 Canola endoplasmic reticulum, plasma membrane, vacuole 37.5 37.85
GSMUA_Achr6P10010_001 Banana nucleus, peroxisome, plasma membrane 55.09 37.42
CDX85047 Canola endoplasmic reticulum 37.04 37.38
CDY00102 Canola cytosol 29.17 37.28
CDX96872 Canola endoplasmic reticulum, extracellular, plasma membrane 35.65 36.15
CDY62212 Canola endoplasmic reticulum, extracellular, plasma membrane 34.72 35.21
CDY33785 Canola endoplasmic reticulum, extracellular, plasma membrane 34.26 34.91
CDY16125 Canola endoplasmic reticulum, extracellular, plasma membrane 34.26 34.91
CDX95934 Canola vacuole 34.72 34.88
CDY40925 Canola endoplasmic reticulum 34.72 34.88
CDY45170 Canola endoplasmic reticulum, extracellular 34.26 34.58
CDY03005 Canola endoplasmic reticulum, extracellular, plasma membrane 33.8 34.11
CDY61620 Canola endoplasmic reticulum 33.8 34.11
CDY19998 Canola endoplasmic reticulum, extracellular 33.8 33.8
CDY24142 Canola endoplasmic reticulum, plasma membrane, vacuole 33.33 33.64
CDX85243 Canola mitochondrion 33.8 32.88
CDY09334 Canola endoplasmic reticulum, extracellular, vacuole 31.94 31.94
CDY44411 Canola golgi, plasma membrane, plastid 32.41 31.53
CDY04053 Canola endoplasmic reticulum 32.41 31.39
CDY53680 Canola endoplasmic reticulum, extracellular, vacuole 30.56 30.56
Protein Annotations
EnsemblPlants:CDX95293EnsemblPlantsGene:GSBRNA2T00100946001GO:A0A078E7E1InterPro:GOLD_domInterPro:IPR009038InterPro:TMP21-related
ncoils:CoilPANTHER:PTHR22811PANTHER:PTHR22811:SF76PFAM:PF01105PFscan:PS50866ProteinID:CDX95293
ProteinID:CDX95293.1SEG:segSignalP:SignalP-noTMSMART:SM01190TMHMM:TMhelixUniParc:UPI0004EC2979
MapMan:22.3.5.2:::::
Description
BnaC09g15770D
Coordinates
chrLK031887:+:1352974..1354663
Molecular Weight (calculated)
24230.1 Da
IEP (calculated)
5.339
GRAVY (calculated)
-0.018
Length
216 amino acids
Sequence
(BLAST)
001: MQPEFATTFS LLSALFFLVT PELIPVSEAV WLNIPKTGTK CVSEEIQSKV VVLADYLVIS DEHSIFPTVS VKVTSPYGNV LHHSDNATHG QFAFTTQESG
101: TYLACFEAEG NSHGNKDISI NLDWKTGIAA KDWDSIARKE KIEGVELELR KLEGAVEGIH ENLLYLKDRE AEMRIVSEKT NSRVAWYSIM SLGICIVVSG
201: LQILYLKQYF ERKKLI
Best Arabidopsis Sequence Match ( AT1G57620.1 )
(BLAST)
001: MKKKMIPTTI LLSALIFSLS PICEAVWLTV PHTGSKCVSE EIQSNVIVLA DYLVISEEHS IFPTVSVKVT APYGTVLHHR ENTTNGQFAF TTQESGTYLA
101: CFEADAKSHG NKDFSINIDW KTGIAAKDWD SIARKEKIEG VELEFKKLEG AVEAIHENLI YLRNREAEMR IVSEKTNSRV AWYSIMSLGI CIVVSGLQIL
201: YLKQYFEKKK LI
Arabidopsis Description
CYBTransmembrane emp24 domain-containing protein p24delta4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FVU0]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.