CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 5
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44411	Canola	golgi, plasma membrane, plastid	98.65	99.1
Bra033081.1-P	Field mustard	golgi, plasma membrane, plastid	98.21	98.65
CDY00102	Canola	cytosol	65.92	86.98
CDY19998	Canola	endoplasmic reticulum, extracellular	82.06	84.72
CDX85243	Canola	mitochondrion	83.86	84.23
AT3G29070.1	Thale cress	mitochondrion	78.03	77.33
CDY37184	Canola	endoplasmic reticulum, peroxisome, plastid	14.8	66.0
GSMUA_Achr1P21760_001	Banana	cytosol	45.74	60.35
GSMUA_AchrUn_...	Banana	cytosol	45.74	60.35
VIT_14s0108g01140.t01	Wine grape	extracellular	54.71	58.1
CDX96872	Canola	endoplasmic reticulum, extracellular, plasma membrane	52.02	54.46
EER92205	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	52.02	54.21
CDY33785	Canola	endoplasmic reticulum, extracellular, plasma membrane	51.12	53.77
CDY62212	Canola	endoplasmic reticulum, extracellular, plasma membrane	51.12	53.52
CDY16125	Canola	endoplasmic reticulum, extracellular, plasma membrane	50.67	53.3
CDY16181	Canola	endoplasmic reticulum, plasma membrane, vacuole	50.67	52.8
KRH18453	Soybean	golgi, plasma membrane, vacuole	51.12	52.78
CDY09334	Canola	endoplasmic reticulum, extracellular, vacuole	51.12	52.78
CDX85047	Canola	endoplasmic reticulum	50.22	52.34
KRG93569	Soybean	endoplasmic reticulum, extracellular, plasma membrane	50.67	52.31
TraesCS2B01G180800.1	Wheat	mitochondrion	52.91	51.75
CDX95934	Canola	vacuole	49.78	51.63
TraesCS2D01G161400.1	Wheat	endoplasmic reticulum, plastid	52.47	51.32
KRH13540	Soybean	cytosol	17.94	51.28
CDY53680	Canola	endoplasmic reticulum, extracellular, vacuole	49.33	50.93
TraesCS2A01G155600.1	Wheat	golgi	52.02	50.88
Os07t0632700-01	Rice	plasma membrane	52.47	50.87
CDY40925	Canola	endoplasmic reticulum	48.88	50.7
CDY03005	Canola	endoplasmic reticulum, extracellular, plasma membrane	48.43	50.47
Zm00001d022238_P001	Maize	mitochondrion	51.57	50.22
HORVU2Hr1G028220.5	Barley	endoplasmic reticulum, extracellular	52.02	50.0
Os03t0376000-01	Rice	endoplasmic reticulum, plasma membrane	52.02	50.0
EER97600	Sorghum	mitochondrion	51.12	49.78
KRH01218	Soybean	endoplasmic reticulum, plasma membrane, vacuole	47.98	49.08
CDY24142	Canola	endoplasmic reticulum, plasma membrane, vacuole	47.09	49.07
CDY61620	Canola	endoplasmic reticulum	47.09	49.07
Zm00001d006951_P001	Maize	mitochondrion	50.22	48.91
CDY45170	Canola	endoplasmic reticulum, extracellular	46.64	48.6
Zm00001d047163_P001	Maize	endoplasmic reticulum, extracellular, vacuole	42.15	37.9
CDY04681	Canola	endoplasmic reticulum	32.29	34.29
CDY31789	Canola	plasma membrane	32.74	33.95
CDY23801	Canola	endoplasmic reticulum, extracellular, plasma membrane	32.29	33.49
CDY31078	Canola	endoplasmic reticulum	33.63	33.48
CDY20688	Canola	endoplasmic reticulum, golgi, nucleus	33.63	33.48
CDX93498	Canola	endoplasmic reticulum, golgi, plasma membrane	32.74	32.59
CDX95293	Canola	endoplasmic reticulum, extracellular, golgi	31.39	32.41
CDY50894	Canola	endoplasmic reticulum, golgi, plasma membrane	32.29	32.14
CDY39938	Canola	endoplasmic reticulum, extracellular, plasma membrane	30.94	31.94
CDX96570	Canola	endoplasmic reticulum, extracellular, plasma membrane	31.84	30.47
CDY08168	Canola	endoplasmic reticulum	22.42	30.3
CDY00701	Canola	plasma membrane	28.25	30.29
CDX73906	Canola	endoplasmic reticulum, extracellular, plasma membrane	28.25	30.29
CDX73903	Canola	endoplasmic reticulum, extracellular, plasma membrane	28.25	30.29
CDY00971	Canola	plasma membrane	27.8	29.52
CDY08577	Canola	plasma membrane	27.8	29.52
CDY38827	Canola	endoplasmic reticulum, extracellular, vacuole	30.94	28.99
CDY36275	Canola	endoplasmic reticulum, extracellular, plasma membrane	24.66	27.92

Protein Annotations

EnsemblPlants:CDY04053	EnsemblPlantsGene:GSBRNA2T00117655001	GO:A0A078EX00	InterPro:GOLD_dom	InterPro:IPR009038	InterPro:TMP21-related
PANTHER:PTHR22811	PANTHER:PTHR22811:SF47	PFAM:PF01105	PFscan:PS50866	ProteinID:CDY04053	ProteinID:CDY04053.1
SEG:seg	SMART:SM01190	TMHMM:TMhelix	UniParc:UPI0004EB6C78	MapMan:22.3.5.2	:

Description

BnaC02g37680D

Coordinates

chrLK031948:+:834861..836311

Molecular Weight (calculated)

25379.1 Da

IEP (calculated)

7.602

GRAVY (calculated)

-0.038

Length

223 amino acids

Sequence
(BLAST)

001: MDLRLSTCKI QMTTLRLIFI ITMTMLMMRT GDSMRLDLES GTTKCISDDI KMNYLTVGTY SVVNPNEAIH LPASHKIFVT VASPKGHTQH QAENVESGKF
101: VFTAVEDGDY TTCFIAPVLK PPAKFAVDFE WKSGVEAKDW ATIAKRGQIN MLEVEVRKLL DVTESIHDEM FLLREREREM QELNRSTNSR MAGLSLFSLV
201: VTLFVAGLQL WHLKSFLERK KLL

Best Arabidopsis Sequence Match ( AT3G29070.1 )
(BLAST)

001: MDLLPSRYKI HKTKLRWILT MMTMMMMMVM RRGESMRLDM ESGNTKCISD DIKTNYMTVG TYSIVNPNEG HHLPPSHKLF VTVSSPKGKS HHHAENVESG
101: KFVFTAEETG DYMTCFVAPG YRPTAKFAVD FEWKSGVEAK DWTTIAKRGQ ITMLEVEVRK LLDVTETIHE EMFQLIERER EMQELNRSTN SRMAALSLLS
201: FVVTMSVAGL QLRHLKSFLE RKKLL

Arabidopsis Description

Transmembrane emp24 domain-containing protein p24delta11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJV9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.