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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 5
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX96872 Canola endoplasmic reticulum, extracellular, plasma membrane 98.59 98.59
CDY33785 Canola endoplasmic reticulum, extracellular, plasma membrane 90.14 90.57
CDY16125 Canola endoplasmic reticulum, extracellular, plasma membrane 89.2 89.62
AT1G14010.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 82.16 82.55
CDY37184 Canola endoplasmic reticulum, peroxisome, plastid 19.25 82.0
CDY03005 Canola endoplasmic reticulum, extracellular, plasma membrane 72.3 71.96
CDY45170 Canola endoplasmic reticulum, extracellular 71.83 71.5
CDY09334 Canola endoplasmic reticulum, extracellular, vacuole 71.36 70.37
CDY53680 Canola endoplasmic reticulum, extracellular, vacuole 70.89 69.91
GSMUA_Achr1P21760_001 Banana cytosol 51.17 64.5
CDY40925 Canola endoplasmic reticulum 64.79 64.19
CDX95934 Canola vacuole 64.32 63.72
CDY16181 Canola endoplasmic reticulum, plasma membrane, vacuole 63.38 63.08
GSMUA_AchrUn_... Banana cytosol 49.77 62.72
CDX85047 Canola endoplasmic reticulum 62.91 62.62
KRH50555 Soybean endoplasmic reticulum 63.85 61.54
VIT_01s0182g00030.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 60.56 60.85
CDY24142 Canola endoplasmic reticulum, plasma membrane, vacuole 60.56 60.28
KRG89554 Soybean endoplasmic reticulum 61.97 60.0
CDY61620 Canola endoplasmic reticulum 59.62 59.35
PGSC0003DMT400007416 Potato endoplasmic reticulum, extracellular, vacuole 58.22 57.94
Solyc05g013130.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 57.28 57.28
PGSC0003DMT400062438 Potato mitochondrion 57.75 56.94
PGSC0003DMT400073002 Potato extracellular 56.81 56.81
CDY00102 Canola cytosol 45.07 56.8
Solyc04g005570.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 57.28 56.74
Solyc01g010940.2.1 Tomato nucleus, plastid 55.4 54.63
EER92205 Sorghum endoplasmic reticulum, extracellular, plasma membrane 52.58 52.34
Os07t0632700-01 Rice plasma membrane 56.34 52.17
CDY19998 Canola endoplasmic reticulum, extracellular 52.58 51.85
CDX85243 Canola mitochondrion 53.99 51.8
CDY44411 Canola golgi, plasma membrane, plastid 53.99 51.8
Zm00001d022238_P001 Maize mitochondrion 55.4 51.53
CDY04053 Canola endoplasmic reticulum 53.52 51.12
EER97600 Sorghum mitochondrion 54.93 51.09
TraesCS2B01G180800.1 Wheat mitochondrion 54.46 50.88
TraesCS2D01G161400.1 Wheat endoplasmic reticulum, plastid 53.99 50.44
TraesCS2A01G155600.1 Wheat golgi 53.99 50.44
Zm00001d006951_P001 Maize mitochondrion 53.99 50.22
HORVU2Hr1G028220.5 Barley endoplasmic reticulum, extracellular 53.52 49.14
Os03t0376000-01 Rice endoplasmic reticulum, plasma membrane 53.05 48.71
KRH70789 Soybean cytosol, vacuole 16.43 47.95
KRH70788 Soybean extracellular 31.92 47.55
CDY04681 Canola endoplasmic reticulum 38.03 38.57
Zm00001d047163_P001 Maize endoplasmic reticulum, extracellular, vacuole 41.78 35.89
CDY20688 Canola endoplasmic reticulum, golgi, nucleus 37.56 35.71
CDY31078 Canola endoplasmic reticulum 37.56 35.71
CDX96570 Canola endoplasmic reticulum, extracellular, plasma membrane 38.97 35.62
CDX93498 Canola endoplasmic reticulum, golgi, plasma membrane 37.09 35.27
CDY08168 Canola endoplasmic reticulum 27.23 35.15
CDX73903 Canola endoplasmic reticulum, extracellular, plasma membrane 34.27 35.1
CDY00701 Canola plasma membrane 34.27 35.1
CDX73906 Canola endoplasmic reticulum, extracellular, plasma membrane 34.27 35.1
CDY50894 Canola endoplasmic reticulum, golgi, plasma membrane 36.62 34.82
CDY39938 Canola endoplasmic reticulum, extracellular, plasma membrane 35.21 34.72
CDX95293 Canola endoplasmic reticulum, extracellular, golgi 35.21 34.72
CDY38827 Canola endoplasmic reticulum, extracellular, vacuole 38.5 34.45
CDY31789 Canola plasma membrane 34.74 34.42
CDY08577 Canola plasma membrane 33.8 34.29
CDY00971 Canola plasma membrane 33.8 34.29
CDY23801 Canola endoplasmic reticulum, extracellular, plasma membrane 34.27 33.95
CDY36275 Canola endoplasmic reticulum, extracellular, plasma membrane 29.58 31.98
Protein Annotations
MapMan:22.3.5.2GO:A0A078JD13UniProt:A0A078JD13EnsemblPlants:CDY62212ProteinID:CDY62212ProteinID:CDY62212.1
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789
GO:GO:0016020GO:GO:0016021InterPro:GOLD_domEnsemblPlantsGene:GSBRNA2T00036068001InterPro:IPR009038PFAM:PF01105
PFscan:PS50866PANTHER:PTHR22811PANTHER:PTHR22811:SF47SMART:SM01190SignalP:SignalP-noTMInterPro:TMP21-related
TMHMM:TMhelixUniParc:UPI0004EE3B4ASEG:seg:::
Description
BnaCnng39600DBnaCnng39600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JD13]
Coordinates
chrLK034113:+:14518..16112
Molecular Weight (calculated)
24053.8 Da
IEP (calculated)
6.368
GRAVY (calculated)
-0.176
Length
213 amino acids
Sequence
(BLAST)
001: MDLHRSSTII LLILSIISPA TLSMRYELLS GHTKCISEEI HANAMSVGKY SIVNPHEDHP LPASHKITVK VTSPQGTAYH EADGVSTGQF SLTAVETGDY
101: ITCISAVDHK PETMLTIDFD WRTGVHSKDW PNVAKRSQVE NMESDVKKLF DTVTSIHDEM FYLRDREEEM HELNISTNSK MAWLSFLSLG VCLSVAGLQF
201: WHLKTFFEKK KLI
Best Arabidopsis Sequence Match ( AT1G14010.1 )
(BLAST)
001: MNHRRSSIVL LILSILSPVT LSIRYELLSG HTKCISEEIH ANAMTIGKYS IINPHEDHPL PSSHKVTVRV TSPQGTAYHE SDGVESGQFS FVAVETGDYI
101: SCFSAVDHKP ETTLIIDFDW RTGIHTKDWS NVAKKSQVET MEFEVKKLFE TVNGIHDEMF YLRDREEEMH NLNIATNSKM AWLSFVSLAV CLSVAGLQFW
201: HLKTFFQKKK LI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta7 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYG1]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.