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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY61620 Canola endoplasmic reticulum 94.86 94.86
CDY16181 Canola endoplasmic reticulum, plasma membrane, vacuole 78.97 78.97
CDX85047 Canola endoplasmic reticulum 78.04 78.04
AT1G26690.1 Thale cress endoplasmic reticulum, extracellular, vacuole 77.57 77.57
CDY37184 Canola endoplasmic reticulum, peroxisome, plastid 16.82 72.0
CDY40925 Canola endoplasmic reticulum 67.76 67.44
CDX95934 Canola vacuole 67.29 66.98
CDX96872 Canola endoplasmic reticulum, extracellular, plasma membrane 61.68 61.97
CDY33785 Canola endoplasmic reticulum, extracellular, plasma membrane 61.22 61.79
CDY16125 Canola endoplasmic reticulum, extracellular, plasma membrane 60.75 61.32
CDY62212 Canola endoplasmic reticulum, extracellular, plasma membrane 60.28 60.56
VIT_01s0182g00030.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 58.41 58.96
GSMUA_Achr1P21760_001 Banana cytosol 46.26 58.58
PGSC0003DMT400073002 Potato extracellular 57.94 58.22
Solyc05g013130.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 57.48 57.75
KRH50555 Soybean endoplasmic reticulum 59.35 57.47
CDY09334 Canola endoplasmic reticulum, extracellular, vacuole 57.94 57.41
GSMUA_AchrUn_... Banana cytosol 45.33 57.4
PGSC0003DMT400007416 Potato endoplasmic reticulum, extracellular, vacuole 56.07 56.07
KRG89554 Soybean endoplasmic reticulum 57.48 55.91
CDY03005 Canola endoplasmic reticulum, extracellular, plasma membrane 55.14 55.14
CDY53680 Canola endoplasmic reticulum, extracellular, vacuole 55.61 55.09
Solyc04g005570.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 55.14 54.88
CDY45170 Canola endoplasmic reticulum, extracellular 54.67 54.67
PGSC0003DMT400062438 Potato mitochondrion 53.74 53.24
Solyc01g010940.2.1 Tomato nucleus, plastid 52.8 52.31
EER92205 Sorghum endoplasmic reticulum, extracellular, plasma membrane 51.87 51.87
Zm00001d022238_P001 Maize mitochondrion 55.14 51.53
CDY00102 Canola cytosol 40.65 51.48
EER97600 Sorghum mitochondrion 54.67 51.09
Zm00001d006951_P001 Maize mitochondrion 53.74 50.22
Os07t0632700-01 Rice plasma membrane 53.27 49.57
TraesCS2B01G180800.1 Wheat mitochondrion 51.4 48.25
KRH70789 Soybean cytosol, vacuole 16.36 47.95
Os03t0376000-01 Rice endoplasmic reticulum, plasma membrane 51.87 47.84
CDX85243 Canola mitochondrion 49.53 47.75
TraesCS2D01G161400.1 Wheat endoplasmic reticulum, plastid 50.47 47.37
TraesCS2A01G155600.1 Wheat golgi 50.47 47.37
CDY44411 Canola golgi, plasma membrane, plastid 49.07 47.3
CDY04053 Canola endoplasmic reticulum 49.07 47.09
KRH70788 Soybean extracellular 31.31 46.85
CDY19998 Canola endoplasmic reticulum, extracellular 47.2 46.76
HORVU2Hr1G028220.5 Barley endoplasmic reticulum, extracellular 49.53 45.69
CDY04681 Canola endoplasmic reticulum 34.11 34.76
Zm00001d047163_P001 Maize endoplasmic reticulum, extracellular, vacuole 39.72 34.27
CDY31078 Canola endoplasmic reticulum 35.51 33.93
CDY20688 Canola endoplasmic reticulum, golgi, nucleus 35.05 33.48
CDX95293 Canola endoplasmic reticulum, extracellular, golgi 33.64 33.33
CDY39938 Canola endoplasmic reticulum, extracellular, plasma membrane 33.18 32.87
CDY00701 Canola plasma membrane 31.78 32.69
CDY31789 Canola plasma membrane 32.71 32.56
CDY23801 Canola endoplasmic reticulum, extracellular, plasma membrane 32.71 32.56
CDX73903 Canola endoplasmic reticulum, extracellular, plasma membrane 31.31 32.21
CDX73906 Canola endoplasmic reticulum, extracellular, plasma membrane 31.31 32.21
CDY50894 Canola endoplasmic reticulum, golgi, plasma membrane 33.18 31.7
CDY08168 Canola endoplasmic reticulum 24.3 31.52
CDX96570 Canola endoplasmic reticulum, extracellular, plasma membrane 34.11 31.33
CDY38827 Canola endoplasmic reticulum, extracellular, vacuole 34.58 31.09
CDX93498 Canola endoplasmic reticulum, golgi, plasma membrane 32.24 30.8
CDY00971 Canola plasma membrane 29.44 30.0
CDY08577 Canola plasma membrane 29.44 30.0
CDY36275 Canola endoplasmic reticulum, extracellular, plasma membrane 27.57 29.95
Protein Annotations
MapMan:22.3.5.2GO:A0A078GG70UniProt:A0A078GG70EnsemblPlants:CDY24142ProteinID:CDY24142ProteinID:CDY24142.1
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789
GO:GO:0016020GO:GO:0016021InterPro:GOLD_domEnsemblPlantsGene:GSBRNA2T00024705001InterPro:IPR009038PFAM:PF01105
PFscan:PS50866PANTHER:PTHR22811PANTHER:PTHR22811:SF47SMART:SM01190SignalP:SignalP-noTMInterPro:TMP21-related
TMHMM:TMhelixUniParc:UPI0004EEDB23::::
Description
BnaC03g57350DBnaC03g57350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GG70]
Coordinates
chrLK032154:-:74921..75813
Molecular Weight (calculated)
24146.1 Da
IEP (calculated)
7.150
GRAVY (calculated)
-0.165
Length
214 amino acids
Sequence
(BLAST)
001: MVLRSKYLCS FLLIIAILSH VSQSLHFELK SGKSKCISED IKSHAMTVGK YTVVNPNEPY PTPQSHKINI RVTSSHGNTY HHAEEVDSGQ FSFTAVEGGE
101: YSACFAAHDH KPDVTLGIDL EWGTGVHYKS LGSLAKRSKV EVMEFEVKAL IETVNSIHDE MFYLRDREEE MQDLNRATNS KMAWLGLLSL FVCLGVAGMQ
201: FMHLKTFFEK KKVI
Best Arabidopsis Sequence Match ( AT1G14010.1 )
(BLAST)
001: MNHRRSSIVL LILSILSPVT LSIRYELLSG HTKCISEEIH ANAMTIGKYS IINPHEDHPL PSSHKVTVRV TSPQGTAYHE SDGVESGQFS FVAVETGDYI
101: SCFSAVDHKP ETTLIIDFDW RTGIHTKDWS NVAKKSQVET MEFEVKKLFE TVNGIHDEMF YLRDREEEMH NLNIATNSKM AWLSFVSLAV CLSVAGLQFW
201: HLKTFFQKKK LI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta7 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYG1]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.