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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • endoplasmic reticulum 4
  • extracellular 3
  • vacuole 4
  • plasma membrane 4
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra024694.1-P Field mustard endoplasmic reticulum, plasma membrane 99.53 99.53
CDX85047 Canola endoplasmic reticulum 98.6 98.6
AT1G26690.1 Thale cress endoplasmic reticulum, extracellular, vacuole 87.38 87.38
CDY61620 Canola endoplasmic reticulum 80.84 80.84
CDY24142 Canola endoplasmic reticulum, plasma membrane, vacuole 78.97 78.97
CDY40925 Canola endoplasmic reticulum 75.23 74.88
CDX95934 Canola vacuole 74.77 74.42
CDY37184 Canola endoplasmic reticulum, peroxisome, plastid 16.36 70.0
CDY16125 Canola endoplasmic reticulum, extracellular, plasma membrane 63.55 64.15
CDX96872 Canola endoplasmic reticulum, extracellular, plasma membrane 63.55 63.85
CDY33785 Canola endoplasmic reticulum, extracellular, plasma membrane 63.08 63.68
CDY62212 Canola endoplasmic reticulum, extracellular, plasma membrane 63.08 63.38
VIT_01s0182g00030.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 61.68 62.26
KRH50555 Soybean endoplasmic reticulum 64.02 61.99
GSMUA_Achr1P21760_001 Banana cytosol 48.6 61.54
Solyc05g013130.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 60.75 61.03
KRG89554 Soybean endoplasmic reticulum 62.62 60.91
PGSC0003DMT400073002 Potato extracellular 60.28 60.56
GSMUA_AchrUn_... Banana cytosol 47.2 59.76
Solyc04g005570.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 59.81 59.53
PGSC0003DMT400007416 Potato endoplasmic reticulum, extracellular, vacuole 59.35 59.35
CDY09334 Canola endoplasmic reticulum, extracellular, vacuole 59.35 58.8
CDY03005 Canola endoplasmic reticulum, extracellular, plasma membrane 58.41 58.41
CDY45170 Canola endoplasmic reticulum, extracellular 57.01 57.01
CDY53680 Canola endoplasmic reticulum, extracellular, vacuole 57.01 56.48
Os07t0632700-01 Rice plasma membrane 58.88 54.78
EER92205 Sorghum endoplasmic reticulum, extracellular, plasma membrane 54.67 54.67
CDY00102 Canola cytosol 42.99 54.44
PGSC0003DMT400062438 Potato mitochondrion 54.67 54.17
Solyc01g010940.2.1 Tomato nucleus, plastid 54.21 53.7
Zm00001d022238_P001 Maize mitochondrion 56.54 52.84
EER97600 Sorghum mitochondrion 56.07 52.4
TraesCS2B01G180800.1 Wheat mitochondrion 55.61 52.19
CDX85243 Canola mitochondrion 53.74 51.8
TraesCS2A01G155600.1 Wheat golgi 55.14 51.75
Zm00001d006951_P001 Maize mitochondrion 55.14 51.53
TraesCS2D01G161400.1 Wheat endoplasmic reticulum, plastid 54.67 51.32
CDY44411 Canola golgi, plasma membrane, plastid 52.8 50.9
Os03t0376000-01 Rice endoplasmic reticulum, plasma membrane 55.14 50.86
CDY04053 Canola endoplasmic reticulum 52.8 50.67
CDY19998 Canola endoplasmic reticulum, extracellular 50.93 50.46
HORVU2Hr1G028220.5 Barley endoplasmic reticulum, extracellular 54.21 50.0
KRH70788 Soybean extracellular 33.18 49.65
KRH70789 Soybean cytosol, vacuole 16.36 47.95
CDY04681 Canola endoplasmic reticulum 37.85 38.57
Zm00001d047163_P001 Maize endoplasmic reticulum, extracellular, vacuole 43.93 37.9
CDX95293 Canola endoplasmic reticulum, extracellular, golgi 37.85 37.5
CDY31789 Canola plasma membrane 37.38 37.21
CDY39938 Canola endoplasmic reticulum, extracellular, plasma membrane 37.38 37.04
CDY23801 Canola endoplasmic reticulum, extracellular, plasma membrane 36.92 36.74
CDY31078 Canola endoplasmic reticulum 37.85 36.16
CDY20688 Canola endoplasmic reticulum, golgi, nucleus 37.38 35.71
CDY50894 Canola endoplasmic reticulum, golgi, plasma membrane 36.92 35.27
CDX93498 Canola endoplasmic reticulum, golgi, plasma membrane 36.92 35.27
CDX96570 Canola endoplasmic reticulum, extracellular, plasma membrane 37.85 34.76
CDY38827 Canola endoplasmic reticulum, extracellular, vacuole 37.38 33.61
CDX73903 Canola endoplasmic reticulum, extracellular, plasma membrane 31.78 32.69
CDX73906 Canola endoplasmic reticulum, extracellular, plasma membrane 31.78 32.69
CDY00701 Canola plasma membrane 31.78 32.69
CDY08168 Canola endoplasmic reticulum 24.77 32.12
CDY00971 Canola plasma membrane 30.84 31.43
CDY08577 Canola plasma membrane 30.84 31.43
CDY36275 Canola endoplasmic reticulum, extracellular, plasma membrane 28.04 30.46
Protein Annotations
MapMan:22.3.5.2GO:A0A078FSX2UniProt:A0A078FSX2EnsemblPlants:CDY16181ProteinID:CDY16181ProteinID:CDY16181.1
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789
GO:GO:0016020GO:GO:0016021InterPro:GOLD_domEnsemblPlantsGene:GSBRNA2T00090624001InterPro:IPR009038PFAM:PF01105
PFscan:PS50866PANTHER:PTHR22811PANTHER:PTHR22811:SF47SMART:SM01190SignalP:SignalP-noTMInterPro:TMP21-related
TMHMM:TMhelixUniParc:UPI0004EE6279::::
Description
BnaA09g29150DBnaA09g29150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FSX2]
Coordinates
chrLK032061:-:326913..328054
Molecular Weight (calculated)
24284.1 Da
IEP (calculated)
7.303
GRAVY (calculated)
-0.212
Length
214 amino acids
Sequence
(BLAST)
001: MVLRSENLWT FLITLAIISR VSQSLHFELR SGRTKCISED IKSNSMTVGK YTVVNPNEAH PSPPSHKISI RVTSSYGNTF HHAEDVDSGQ FAFTAVEAGD
101: YMACFTANGH KPEVTLSIDF DWRTGIHSKS WGSVAKKSQV EVMEFEVKQL IETVNSIHDE MFYLRDREEE MQNLNRGTNS KMAWLSLLSL FVCLGVAGMQ
201: FMHLKTFLEK KKVI
Best Arabidopsis Sequence Match ( AT1G26690.1 )
(BLAST)
001: MFLRSLNLCT ILLFLAISSQ VSQSLHFELQ SGRTKCISED IKSNSMTVGK YTVVNPNEAH PSPQSHKISI RVTSSYGNTY HHAEDVESGQ FAFTAVESGD
101: YMACYTAVDH KPEVTLSIDF DWRTGVQSKS WSSVAKKSQV EVMEFDVKRL IETVNSIHEE MFYLREREEE MQNLNRATNS KMAWLSFLSL FVCLGVAGMQ
201: FVHLKTFFEK KKVI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQY3]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.