CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 5
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37184	Canola	endoplasmic reticulum, peroxisome, plastid	18.79	62.0
CDY04681	Canola	endoplasmic reticulum	78.79	61.9
AT1G21900.1	Thale cress	plasma membrane	70.3	53.7
CDX96570	Canola	endoplasmic reticulum, extracellular, plasma membrane	69.09	48.93
CDY38827	Canola	endoplasmic reticulum, extracellular, vacuole	69.7	48.32
KRH53215	Soybean	endoplasmic reticulum	50.91	39.62
TraesCS7D01G170400.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	46.06	39.18
TraesCS7A01G169500.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	46.06	39.18
KRH64707	Soybean	plasma membrane	50.3	38.6
TraesCS6D01G309100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	49.09	38.39
TraesCS6B01G361000.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	49.09	38.39
TraesCS6A01G330200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	49.09	38.39
Os06t0210100-01	Rice	plastid	48.48	38.28
CDX95293	Canola	endoplasmic reticulum, extracellular, golgi	49.7	37.96
CDY39938	Canola	endoplasmic reticulum, extracellular, plasma membrane	49.09	37.5
GSMUA_Achr6P02320_001	Banana	endoplasmic reticulum, plasma membrane	49.09	37.5
CDY31789	Canola	plasma membrane	48.48	37.21
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, plasma membrane	48.48	37.04
Zm00001d037163_P002	Maize	extracellular, plasma membrane	47.27	36.97
VIT_18s0001g03200.t01	Wine grape	endoplasmic reticulum	45.45	36.95
EER88046	Sorghum	endoplasmic reticulum	47.88	36.92
KRH18772	Soybean	plasma membrane	47.88	36.74
Solyc11g013000.1.1	Tomato	plastid	46.67	36.67
PGSC0003DMT400002378	Potato	endoplasmic reticulum, extracellular, plasma membrane	46.67	36.67
CDY20688	Canola	endoplasmic reticulum, golgi, nucleus	49.7	36.61
CDY31078	Canola	endoplasmic reticulum	49.7	36.61
TraesCS5B01G233900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	46.06	36.36
CDY23801	Canola	endoplasmic reticulum, extracellular, plasma membrane	47.27	36.28
TraesCS7B01G074300.1	Wheat	plasma membrane	47.27	36.11
EER96837	Sorghum	extracellular	45.45	36.06
Os09t0453200-00	Rice	endoplasmic reticulum, plasma membrane	46.06	35.85
KRH16308	Soybean	endoplasmic reticulum	46.67	35.81
TraesCS5D01G242600.1	Wheat	endoplasmic reticulum	45.45	35.71
TraesCS5A01G235500.1	Wheat	extracellular, vacuole	45.45	35.71
Os02t0768200-01	Rice	endoplasmic reticulum, plasma membrane, vacuole	46.67	35.32
EES07590	Sorghum	endoplasmic reticulum, extracellular, vacuole	44.24	35.27
CDX93498	Canola	endoplasmic reticulum, golgi, plasma membrane	46.67	34.38
Bra017957.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	64.24	34.08
CDY50894	Canola	endoplasmic reticulum, golgi, plasma membrane	46.06	33.93
GSMUA_Achr3P20310_001	Banana	plasma membrane	44.24	33.8
PGSC0003DMT400045270	Potato	endoplasmic reticulum, extracellular, plasma membrane	42.42	32.56
HORVU5Hr1G067730.1	Barley	cytosol, peroxisome	44.24	32.44
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, vacuole	43.03	32.42
PGSC0003DMT400045273	Potato	endoplasmic reticulum, extracellular, plasma membrane	41.21	32.38
PGSC0003DMT400045277	Potato	extracellular	41.82	32.24
Solyc06g060450.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	41.82	32.09
Solyc06g060440.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	40.61	31.46
CDY00971	Canola	plasma membrane	39.39	30.95
CDY08577	Canola	plasma membrane	39.39	30.95
CDX73906	Canola	endoplasmic reticulum, extracellular, plasma membrane	38.79	30.77
CDX73903	Canola	endoplasmic reticulum, extracellular, plasma membrane	38.79	30.77
CDY00701	Canola	plasma membrane	37.58	29.81
Zm00001d005857_P001	Maize	cytosol, golgi	27.88	28.57
Solyc06g060430.1.1	Tomato	cytosol	15.76	28.26
HORVU7Hr1G035390.1	Barley	mitochondrion, plastid	46.67	28.1
Zm00001d018194_P001	Maize	extracellular	28.48	27.98
CDY09334	Canola	endoplasmic reticulum, extracellular, vacuole	35.76	27.31
CDY62212	Canola	endoplasmic reticulum, extracellular, plasma membrane	35.15	27.23
CDX96872	Canola	endoplasmic reticulum, extracellular, plasma membrane	35.15	27.23
CDY16125	Canola	endoplasmic reticulum, extracellular, plasma membrane	34.55	26.89
CDY33785	Canola	endoplasmic reticulum, extracellular, plasma membrane	34.55	26.89
CDY36275	Canola	endoplasmic reticulum, extracellular, plasma membrane	30.91	25.89
CDY53680	Canola	endoplasmic reticulum, extracellular, vacuole	33.33	25.46
CDY16181	Canola	endoplasmic reticulum, plasma membrane, vacuole	32.12	24.77
CDY24142	Canola	endoplasmic reticulum, plasma membrane, vacuole	31.52	24.3
CDX85047	Canola	endoplasmic reticulum	31.52	24.3
CDY03005	Canola	endoplasmic reticulum, extracellular, plasma membrane	31.52	24.3
CDY61620	Canola	endoplasmic reticulum	31.52	24.3
KXG25366	Sorghum	plasma membrane	35.76	23.6
CDY45170	Canola	endoplasmic reticulum, extracellular	30.3	23.36
CDX95934	Canola	vacuole	29.7	22.79
CDY44411	Canola	golgi, plasma membrane, plastid	30.3	22.52
CDY04053	Canola	endoplasmic reticulum	30.3	22.42
CDY19998	Canola	endoplasmic reticulum, extracellular	29.09	22.22
CDX85243	Canola	mitochondrion	29.7	22.07
CDY40925	Canola	endoplasmic reticulum	28.48	21.86
GSMUA_Achr6P10010_001	Banana	nucleus, peroxisome, plasma membrane	41.21	21.38
CDY00102	Canola	cytosol	21.82	21.3
Os08t0469400-00	Rice	endoplasmic reticulum, extracellular, vacuole	15.76	18.98

Protein Annotations

EnsemblPlants:CDY08168	EnsemblPlantsGene:GSBRNA2T00125465001	GO:A0A078F8T6	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:GOLD_dom	InterPro:IPR009038	InterPro:TMP21-related	PANTHER:PTHR22811	PANTHER:PTHR22811:SF76	PFAM:PF01105
ProteinID:CDY08168	ProteinID:CDY08168.1	SignalP:SignalP-noTM	SMART:SM01190	TMHMM:TMhelix	UniParc:UPI0004EF264D
UniProt:A0A078F8T6	MapMan:22.3.5.2	:	:	:	:

Description

BnaA06g15580DBnaA06g15580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F8T6]

Coordinates

chrLK031983:+:814766..815947

Molecular Weight (calculated)

19063.8 Da

IEP (calculated)

10.259

GRAVY (calculated)

0.141

Length

165 amino acids

Sequence
(BLAST)

001: MSIRGGLVAF SPILAVLLFM LTVNHGEAIW LTIPPTGGTK CVSEEIQSNV VVLADYYVVY EHILKTHRLF LLRLVLRPEI ETLLLKRKKS RQGVELQLRR
101: LDGLVQSIRE NINYIKDRKA EMREVSETTN SRMAWFSIMS LGVCLCVAGS QIWYLKRYFH KKKLI

Best Arabidopsis Sequence Match ( AT1G21900.1 )
(BLAST)

001: MAINRIAHGS LFLTVVLFFL TVNYGEAIWL TIPTTGGTKC VSEEIQSNVV VLADYYVVDE HNPENTPAVS SKVTSPYGNN LHHQENVTHG QFAFTTQEAG
101: NYLACFWIDS SHHLANPITL GVDWKMGIAA KDWDSVAKKE KIEGVELQLR RLEGLVLSIR ENLNYIKDRE AEMREVSETT NSRVAWFSIM SLGVCVVVVG
201: SQILYLKRYF HKKKLI

Arabidopsis Description

Transmembrane emp24 domain-containing protein p24delta5 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWM6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.