Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH43057 | Soybean | extracellular | 43.07 | 37.82 |
| Os09t0453200-00 | Rice | endoplasmic reticulum, plasma membrane | 56.93 | 36.79 |
| Bra020010.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi | 51.09 | 33.02 |
| Os06t0210100-01 | Rice | plastid | 50.37 | 33.01 |
| KXG25366 | Sorghum | plasma membrane | 59.12 | 32.4 |
| Bra030786.1-P | Field mustard | extracellular | 48.18 | 31.28 |
| CDY50894 | Canola | endoplasmic reticulum, golgi, plasma membrane | 51.09 | 31.25 |
| CDX93498 | Canola | endoplasmic reticulum, golgi, plasma membrane | 51.09 | 31.25 |
| Os02t0768200-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 49.63 | 31.19 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 48.91 | 31.02 |
| AT1G09580.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 48.91 | 30.88 |
| CDY31789 | Canola | plasma membrane | 48.18 | 30.7 |
| GSMUA_Achr6P02320_001 | Banana | endoplasmic reticulum, plasma membrane | 47.45 | 30.09 |
| Solyc11g013000.1.1 | Tomato | plastid | 45.99 | 30.0 |
| KRH18772 | Soybean | plasma membrane | 46.72 | 29.77 |
| Bra038147.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 46.72 | 29.77 |
| VIT_12s0034g01440.t01 | Wine grape | endoplasmic reticulum, extracellular | 46.72 | 29.63 |
| AT1G21900.1 | Thale cress | plasma membrane | 46.72 | 29.63 |
| PGSC0003DMT400002378 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 45.26 | 29.52 |
| CDY31078 | Canola | endoplasmic reticulum | 48.18 | 29.46 |
| CDY23801 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 45.99 | 29.3 |
| CDY04681 | Canola | endoplasmic reticulum | 44.53 | 29.05 |
| CDY20688 | Canola | endoplasmic reticulum, golgi, nucleus | 47.45 | 29.02 |
| Solyc01g104220.2.1 | Tomato | endoplasmic reticulum | 44.53 | 28.77 |
| AT1G57620.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 44.53 | 28.77 |
| CDY39938 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 45.26 | 28.7 |
| CDX95293 | Canola | endoplasmic reticulum, extracellular, golgi | 45.26 | 28.7 |
| Bra027911.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 45.26 | 28.7 |
| PGSC0003DMT400061146 | Potato | extracellular | 43.8 | 28.57 |
| Solyc10g045640.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 44.53 | 28.5 |
| KRH59179 | Soybean | endoplasmic reticulum | 43.8 | 28.44 |
| KRH16308 | Soybean | endoplasmic reticulum | 44.53 | 28.37 |
| KRH10436 | Soybean | endoplasmic reticulum | 44.53 | 28.37 |
| GSMUA_Achr3P20310_001 | Banana | plasma membrane | 44.53 | 28.24 |
| CDX96570 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 47.45 | 27.9 |
| KRH53215 | Soybean | endoplasmic reticulum | 43.07 | 27.83 |
| KRH64707 | Soybean | plasma membrane | 43.07 | 27.44 |
| CDY38827 | Canola | endoplasmic reticulum, extracellular, vacuole | 47.45 | 27.31 |
| PGSC0003DMT400045273 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 41.61 | 27.14 |
| PGSC0003DMT400045277 | Potato | extracellular | 42.34 | 27.1 |
| Bra016401.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 47.45 | 26.86 |
| Solyc06g060440.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 41.61 | 26.76 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane, vacuole | 40.88 | 25.57 |
| Solyc06g060450.2.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 39.42 | 25.12 |
| PGSC0003DMT400045270 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 38.69 | 24.65 |
| VIT_18s0001g03200.t01 | Wine grape | endoplasmic reticulum | 35.77 | 24.14 |
| KRH44035 | Soybean | endoplasmic reticulum, mitochondrion, plasma membrane | 41.61 | 23.17 |
| Os03t0328300-01 | Rice | extracellular | 23.36 | 22.38 |
| Os07t0632700-01 | Rice | plasma membrane | 34.31 | 20.43 |
| Os03t0376000-01 | Rice | endoplasmic reticulum, plasma membrane | 33.58 | 19.83 |
| GSMUA_Achr6P10010_001 | Banana | nucleus, peroxisome, plasma membrane | 43.8 | 18.87 |
| CDY08168 | Canola | endoplasmic reticulum | 18.98 | 15.76 |
| Bra017957.1-P | Field mustard | endoplasmic reticulum, golgi, vacuole | 35.04 | 15.43 |
| Solyc06g060430.1.1 | Tomato | cytosol | 8.03 | 11.96 |
| KRH48283 | Soybean | cytosol | 3.65 | 6.49 |
Protein Annotations
| EnsemblPlants:Os08t0469400-00 | EnsemblPlantsGene:Os08g0469400 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:GOLD_dom |
| InterPro:IPR009038 | InterPro:TMP21-related | PANTHER:PTHR22811 | PANTHER:PTHR22811:SF73 | PFAM:PF01105 | PFscan:PS50866 |
| ProteinID:BAT05828.1 | SEG:seg | SignalP:SignalP-noTM | UniParc:UPI000393BDA1 | UniProt:A0A0P0XGL8 | MapMan:22.3.5.2 |
Description
Similar to Transmembrane emp24 domain-containing protein 10. (Os08t0469400-00)
Coordinates
chr8:+:23076092..23077193
Molecular Weight (calculated)
15244.3 Da
IEP (calculated)
4.667
GRAVY (calculated)
0.126
Length
137 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQRSVVLAL ALWCLVADGE AVWMELSTTA TKCFSERIQS NVVVIGDYDI LFDGYPTRPI LSIQVTSPYG KVLHHREKVM QGQFSFNTAE PGVYLACFSV
101: DTLDKELVVN LNLDWKTGIA TKDWDALAKI DKLEAST
101: DTLDKELVVN LNLDWKTGIA TKDWDALAKI DKLEAST
001: MKKKMIPTTI LLSALIFSLS PICEAVWLTV PHTGSKCVSE EIQSNVIVLA DYLVISEEHS IFPTVSVKVT APYGTVLHHR ENTTNGQFAF TTQESGTYLA
101: CFEADAKSHG NKDFSINIDW KTGIAAKDWD SIARKEKIEG VELEFKKLEG AVEAIHENLI YLRNREAEMR IVSEKTNSRV AWYSIMSLGI CIVVSGLQIL
201: YLKQYFEKKK LI
101: CFEADAKSHG NKDFSINIDW KTGIAAKDWD SIARKEKIEG VELEFKKLEG AVEAIHENLI YLRNREAEMR IVSEKTNSRV AWYSIMSLGI CIVVSGLQIL
201: YLKQYFEKKK LI
Arabidopsis Description
CYBTransmembrane emp24 domain-containing protein p24delta4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FVU0]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.