Factsheet for Os03t0328300-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 5
peroxisome 1
mitochondrion 1
plastid 1
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, mitochondrion, nucleus, peroxisome, plasma membrane, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU92664	Sorghum	extracellular	65.73	38.21
OQU80774	Sorghum	cytosol, plastid	57.34	37.27
OQU86595	Sorghum	cytosol	57.34	33.61
GSMUA_Achr6P08610_001	Banana	endoplasmic reticulum, plasma membrane	41.96	28.04
Os08t0469400-00	Rice	endoplasmic reticulum, extracellular, vacuole	22.38	23.36
Os03t0376000-01	Rice	endoplasmic reticulum, plasma membrane	34.27	21.12
Os07t0632700-01	Rice	plasma membrane	30.07	18.7
Os06t0210100-01	Rice	plastid	27.27	18.66
Os02t0768200-01	Rice	endoplasmic reticulum, plasma membrane, vacuole	27.97	18.35
Os09t0453200-00	Rice	endoplasmic reticulum, plasma membrane	25.17	16.98

Protein Annotations

MapMan:35.2	EntrezGene:9270833	UniProt:A0A0P0VXR4	ProteinID:BAS84010.1	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0016020	GO:GO:0016021
InterPro:GOLD_dom	InterPro:IPR009038	EnsemblPlantsGene:Os03g0328300	EnsemblPlants:Os03t0328300-01	PFAM:PF01105	PFscan:PS50866
PANTHER:PTHR22811	PANTHER:PTHR22811:SF69	SignalP:SignalP-noTM	InterPro:TMP21-related	UniParc:UPI0003938BA2	RefSeq:XP_015632684.1
SEG:seg	:	:	:	:	:

Description

Hypothetical conserved gene. (Os03t0328300-01)

Coordinates

chr3:+:12019156..12020956

Molecular Weight (calculated)

14929.5 Da

IEP (calculated)

5.216

GRAVY (calculated)

-0.013

Length

143 amino acids

Sequence
(BLAST)

001: MTASRSLLAV ILLAATAADV DALVFDVPSG GSKCLTEELR RGALSHASYR VAEATSAASS AVSARVAGPR GEELHLTEGV EAGEFRFEAA EDGRYTACFW
101: TPRYLRGAIV SIDVQWTTEV RDHAGGAGSP PAVAAAKEGH IDK

Best Arabidopsis Sequence Match ( AT1G09580.1 )
(BLAST)

001: MKMTAKMRRE FPTAFLLLFL VPVMIPVGEA VWLDVPPTGT KCVSEEIQSN VVVLADYLII SEDHEVMPTI SVKVTSPYGN NLHNMENVTH GQFAFTTQES
101: GNYLACFWAD EKSHGNKNVS INIDWRTGIA AKDWASIAKK EKIEGVELEI RKLEGAVEAI HENILYLRNR EADMRTMSEK TNSRVAWYSI MSLGVCIAVS
201: GFQVLYLKQY FEKKKLI

Arabidopsis Description

Transmembrane emp24 domain-containing protein p24delta3 [Source:UniProtKB/Swiss-Prot;Acc:Q6IDL4]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.