CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
extracellular 6
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0328300-01	Rice	extracellular	38.21	65.73
OQU80774	Sorghum	cytosol, plastid	44.72	50.0
OQU86595	Sorghum	cytosol	43.09	43.44
GSMUA_Achr6P08610_001	Banana	endoplasmic reticulum, plasma membrane	32.11	36.92
EER92205	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	26.02	29.91
EER97600	Sorghum	mitochondrion	27.64	29.69
EES07590	Sorghum	endoplasmic reticulum, extracellular, vacuole	23.98	28.5
EER96837	Sorghum	extracellular	23.58	27.88
EER88046	Sorghum	endoplasmic reticulum	22.76	26.17
KXG25366	Sorghum	plasma membrane	20.33	20.0

Protein Annotations

MapMan:22.3.5.2	EntrezGene:8083679	UniProt:A0A1Z5S9Q2	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0016020	GO:GO:0016021	InterPro:GOLD_dom
InterPro:IPR009038	EnsemblPlants:OQU92664	ProteinID:OQU92664	ProteinID:OQU92664.1	PFAM:PF01105	PFscan:PS50866
PANTHER:PTHR22811	PANTHER:PTHR22811:SF69	SMART:SM01190	EnsemblPlantsGene:SORBI_3001G385200	SignalP:SignalP-noTM	InterPro:TMP21-related
UniParc:UPI000B8BA06D	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:67266918..67269426

Molecular Weight (calculated)

26956.9 Da

IEP (calculated)

6.847

GRAVY (calculated)

-0.192

Length

246 amino acids

Sequence
(BLAST)

001: MAPPLSILAV ILHVVSATAV KALVFDVPSG SSKCLTEELH RRAVSHASYR VVAESTSAAD RRILVRVTGP RGEELYVAEG GERGEFRFEA AEDGEHTACF
101: WSPRYERGTV VSVDVQWATT SVGGGAHAGG SGSPPAVAVA SEGRIATIIG ELKKLEDSAR LIHQEMLSFR QSELEMQRLN EDTATRIEYQ SFMFRNKPCL
201: LMHQSWHSEL WSREAVGTWK FQRTTSLGAH QSTCLLPSQL ASSHCC

Best Arabidopsis Sequence Match ( AT1G14010.1 )
(BLAST)

001: MNHRRSSIVL LILSILSPVT LSIRYELLSG HTKCISEEIH ANAMTIGKYS IINPHEDHPL PSSHKVTVRV TSPQGTAYHE SDGVESGQFS FVAVETGDYI
101: SCFSAVDHKP ETTLIIDFDW RTGIHTKDWS NVAKKSQVET MEFEVKKLFE TVNGIHDEMF YLRDREEEMH NLNIATNSKM AWLSFVSLAV CLSVAGLQFW
201: HLKTFFQKKK LI

Arabidopsis Description

Transmembrane emp24 domain-containing protein p24delta7 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYG1]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.