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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 3
  • endoplasmic reticulum 2
  • plasma membrane 3
  • extracellular 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane, plastid
Predotar:mitochondrion
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d022238_P001 Maize mitochondrion 97.82 97.82
Zm00001d006951_P001 Maize mitochondrion 96.51 96.51
TraesCS2B01G180800.1 Wheat mitochondrion 83.84 84.21
TraesCS2A01G155600.1 Wheat golgi 83.84 84.21
Os07t0632700-01 Rice plasma membrane 82.97 82.61
TraesCS2D01G161400.1 Wheat endoplasmic reticulum, plastid 82.1 82.46
HORVU2Hr1G028220.5 Barley endoplasmic reticulum, extracellular 80.35 79.31
EER92205 Sorghum endoplasmic reticulum, extracellular, plasma membrane 73.36 78.5
CDY37184 Canola endoplasmic reticulum, peroxisome, plastid 16.16 74.0
GSMUA_Achr1P21760_001 Banana cytosol 54.15 73.37
GSMUA_AchrUn_... Banana cytosol 52.84 71.6
VIT_14s0108g01140.t01 Wine grape extracellular 57.64 62.86
VIT_01s0182g00030.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 57.21 61.79
KRH50555 Soybean endoplasmic reticulum 57.64 59.73
PGSC0003DMT400073002 Potato extracellular 55.02 59.15
Solyc05g013130.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 55.02 59.15
PGSC0003DMT400007416 Potato endoplasmic reticulum, extracellular, vacuole 54.59 58.41
Solyc04g005570.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 54.59 58.14
CDY00102 Canola cytosol 42.79 57.99
AT1G26690.1 Thale cress endoplasmic reticulum, extracellular, vacuole 54.15 57.94
KRH18453 Soybean golgi, plasma membrane, vacuole 54.59 57.87
KRG89554 Soybean endoplasmic reticulum 55.46 57.73
KRG93569 Soybean endoplasmic reticulum, extracellular, plasma membrane 54.15 57.41
Bra026866.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 52.84 57.08
CDY33785 Canola endoplasmic reticulum, extracellular, plasma membrane 52.84 57.08
CDY16125 Canola endoplasmic reticulum, extracellular, plasma membrane 52.4 56.6
CDX85047 Canola endoplasmic reticulum 52.84 56.54
KRH13540 Soybean cytosol 19.21 56.41
CDX96872 Canola endoplasmic reticulum, extracellular, plasma membrane 52.4 56.34
CDY16181 Canola endoplasmic reticulum, plasma membrane, vacuole 52.4 56.07
CDY61620 Canola endoplasmic reticulum 51.97 55.61
Bra016283.1-P Field mustard endoplasmic reticulum 51.97 55.61
Bra024694.1-P Field mustard endoplasmic reticulum, plasma membrane 51.97 55.61
PGSC0003DMT400062438 Potato mitochondrion 52.4 55.56
Solyc01g010940.2.1 Tomato nucleus, plastid 51.97 55.09
CDY62212 Canola endoplasmic reticulum, extracellular, plasma membrane 51.09 54.93
KRH70789 Soybean cytosol, vacuole 17.47 54.79
AT1G14010.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 50.66 54.72
CDY24142 Canola endoplasmic reticulum, plasma membrane, vacuole 51.09 54.67
Bra004382.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 50.66 53.95
CDX95934 Canola vacuole 50.66 53.95
AT2G03290.1 Thale cress extracellular 49.34 53.05
CDY40925 Canola endoplasmic reticulum 49.78 53.02
AT1G69460.1 Thale cress endoplasmic reticulum, extracellular, vacuole 48.91 52.34
Bra036221.1-P Field mustard endoplasmic reticulum, extracellular 49.34 52.31
CDY19998 Canola endoplasmic reticulum, extracellular 49.34 52.31
CDY45170 Canola endoplasmic reticulum, extracellular 48.47 51.87
Bra024781.1-P Field mustard endoplasmic reticulum, extracellular 48.47 51.87
CDY03005 Canola endoplasmic reticulum, extracellular, plasma membrane 48.03 51.4
CDX85243 Canola mitochondrion 49.78 51.35
CDY04053 Canola endoplasmic reticulum 49.78 51.12
CDY44411 Canola golgi, plasma membrane, plastid 49.34 50.9
Bra033081.1-P Field mustard golgi, plasma membrane, plastid 49.34 50.9
Bra026559.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 47.6 50.46
CDY53680 Canola endoplasmic reticulum, extracellular, vacuole 47.6 50.46
CDY09334 Canola endoplasmic reticulum, extracellular, vacuole 47.16 50.0
KRH70788 Soybean extracellular 31.0 49.65
AT3G29070.1 Thale cress mitochondrion 48.03 48.89
KRH01218 Soybean endoplasmic reticulum, plasma membrane, vacuole 46.29 48.62
AT2G03040.1 Thale cress extracellular 33.62 46.39
Bra016715.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 39.74 45.27
EER88046 Sorghum endoplasmic reticulum 41.92 44.86
EES07590 Sorghum endoplasmic reticulum, extracellular, vacuole 37.99 42.03
EER96837 Sorghum extracellular 34.93 38.46
KXG25366 Sorghum plasma membrane 35.81 32.8
OQU92664 Sorghum extracellular 29.69 27.64
OQU80774 Sorghum cytosol, plastid 19.65 20.45
OQU86595 Sorghum cytosol 17.47 16.39
Protein Annotations
MapMan:22.3.5.2EntrezGene:8079371UniProt:C5X380ncoils:CoilEnsemblPlants:EER97600ProteinID:EER97600
ProteinID:EER97600.1GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783
GO:GO:0005789GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021InterPro:GOLD_dom
InterPro:IPR009038PFAM:PF01105PFscan:PS50866PANTHER:PTHR22811PANTHER:PTHR22811:SF112SMART:SM01190
EnsemblPlantsGene:SORBI_3002G386700unigene:Sbi.7008SignalP:SignalP-noTMInterPro:TMP21-relatedTMHMM:TMhelixUniParc:UPI0001A83A0E
RefSeq:XP_002461079.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr2:+:74099462..74102262
Molecular Weight (calculated)
25909.3 Da
IEP (calculated)
8.474
GRAVY (calculated)
-0.238
Length
229 amino acids
Sequence
(BLAST)
001: MAARRLGSTA SRWLRPSALL LLVASALLLA PSPARALRFD LESGHTKCIS DEIKVNAMAV GKYHIVGPDP NFPDAQLPES HRISLRVTSP YGNSMHYAEN
101: VQSGHFAFTA AEAGDYLACF WAPDHKPPVT IGFEFDWRSG VSAKDYPSVA KKGKVDMMEL ELKKLEETIR NIHEEMFYLR EREEEMQDLN RRTNSRMAWL
201: GFLSLGICLS VAGLQLWHLK TFFERKKLL
Best Arabidopsis Sequence Match ( AT1G26690.1 )
(BLAST)
001: MFLRSLNLCT ILLFLAISSQ VSQSLHFELQ SGRTKCISED IKSNSMTVGK YTVVNPNEAH PSPQSHKISI RVTSSYGNTY HHAEDVESGQ FAFTAVESGD
101: YMACYTAVDH KPEVTLSIDF DWRTGVQSKS WSSVAKKSQV EVMEFDVKRL IETVNSIHEE MFYLREREEE MQNLNRATNS KMAWLSFLSL FVCLGVAGMQ
201: FVHLKTFFEK KKVI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQY3]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.