Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU80774 | Sorghum | cytosol, plastid | 71.72 | 79.55 |
| Os03t0328300-01 | Rice | extracellular | 33.61 | 57.34 |
| OQU92664 | Sorghum | extracellular | 43.44 | 43.09 |
| GSMUA_Achr6P08610_001 | Banana | endoplasmic reticulum, plasma membrane | 22.13 | 25.23 |
| EES07590 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 16.39 | 19.32 |
| EER92205 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 15.98 | 18.22 |
| EER97600 | Sorghum | mitochondrion | 16.39 | 17.47 |
| EER88046 | Sorghum | endoplasmic reticulum | 14.34 | 16.36 |
| EER96837 | Sorghum | extracellular | 13.52 | 15.87 |
| KXG25366 | Sorghum | plasma membrane | 11.07 | 10.8 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:35.1 | UniProt:A0A1W0VWW3 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:GOLD_dom | InterPro:IPNS-like | InterPro:IPR009038 | InterPro:IPR027443 |
| EnsemblPlants:OQU86595 | ProteinID:OQU86595 | ProteinID:OQU86595.1 | PFAM:PF01105 | PFscan:PS50866 | PANTHER:PTHR22811 |
| PANTHER:PTHR22811:SF69 | EnsemblPlantsGene:SORBI_3003G110301 | SUPFAM:SSF51197 | InterPro:TMP21-related | UniParc:UPI0009DC8AC5 | SEG:seg |
Description
hypothetical protein
Coordinates
chr3:-:9941238..9941992
Molecular Weight (calculated)
26600.4 Da
IEP (calculated)
5.071
GRAVY (calculated)
-0.288
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MREAEFSALP AEDKAGLYSE DTGKATRIYS STMFDTSTEK SGATASASPA PSPTPRGWPD KPARLREVVE RFTVQTRGLE MQILRLLCEG LGLRPDYLNW
101: DISSGDVMLC DVSATAVMAL VFDVPSGSSK CLTEELRRRA VSHASYRVVA ESTSAADRRI LVRVTGPRGE ELYVAEGGER GEFRFEAAED GEHTACFWSP
201: RYERGAIVSV DVQEAAVIGA KRRARQLGEL SMPAAALDFR TVVG
101: DISSGDVMLC DVSATAVMAL VFDVPSGSSK CLTEELRRRA VSHASYRVVA ESTSAADRRI LVRVTGPRGE ELYVAEGGER GEFRFEAAED GEHTACFWSP
201: RYERGAIVSV DVQEAAVIGA KRRARQLGEL SMPAAALDFR TVVG
001: MKMTAKMRRE FPTAFLLLFL VPVMIPVGEA VWLDVPPTGT KCVSEEIQSN VVVLADYLII SEDHEVMPTI SVKVTSPYGN NLHNMENVTH GQFAFTTQES
101: GNYLACFWAD EKSHGNKNVS INIDWRTGIA AKDWASIAKK EKIEGVELEI RKLEGAVEAI HENILYLRNR EADMRTMSEK TNSRVAWYSI MSLGVCIAVS
201: GFQVLYLKQY FEKKKLI
101: GNYLACFWAD EKSHGNKNVS INIDWRTGIA AKDWASIAKK EKIEGVELEI RKLEGAVEAI HENILYLRNR EADMRTMSEK TNSRVAWYSI MSLGVCIAVS
201: GFQVLYLKQY FEKKKLI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta3 [Source:UniProtKB/Swiss-Prot;Acc:Q6IDL4]
SUBAcon: [golgi,plasma membrane,endoplasmic reticulum]
SUBAcon: [golgi,plasma membrane,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.