Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d018194_P001 | Maize | extracellular | 74.88 | 92.26 |
| TraesCS6B01G361000.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 81.16 | 79.62 |
| TraesCS6A01G330200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 81.16 | 79.62 |
| Os02t0768200-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 83.57 | 79.36 |
| TraesCS6D01G309100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 80.68 | 79.15 |
| EER88046 | Sorghum | endoplasmic reticulum | 79.71 | 77.1 |
| KRH48283 | Soybean | cytosol | 25.12 | 67.53 |
| GSMUA_Achr6P02320_001 | Banana | endoplasmic reticulum, plasma membrane | 69.57 | 66.67 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 67.63 | 64.81 |
| KRH59179 | Soybean | endoplasmic reticulum | 65.7 | 64.45 |
| EER96837 | Sorghum | extracellular | 64.25 | 63.94 |
| VIT_12s0034g01440.t01 | Wine grape | endoplasmic reticulum, extracellular | 66.18 | 63.43 |
| Bra030786.1-P | Field mustard | extracellular | 62.32 | 61.14 |
| GSMUA_Achr3P20310_001 | Banana | plasma membrane | 63.77 | 61.11 |
| KRH18772 | Soybean | plasma membrane | 63.28 | 60.93 |
| KRH43057 | Soybean | extracellular | 45.89 | 60.9 |
| AT1G09580.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 63.77 | 60.83 |
| Bra020010.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi | 61.84 | 60.38 |
| Solyc10g045640.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 62.32 | 60.28 |
| KRH16308 | Soybean | endoplasmic reticulum | 62.32 | 60.0 |
| Solyc11g013000.1.1 | Tomato | plastid | 60.87 | 60.0 |
| Solyc01g104220.2.1 | Tomato | endoplasmic reticulum | 61.35 | 59.91 |
| PGSC0003DMT400061146 | Potato | extracellular | 59.9 | 59.05 |
| AT1G57620.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 60.39 | 58.96 |
| CDX95293 | Canola | endoplasmic reticulum, extracellular, golgi | 61.35 | 58.8 |
| KRH10436 | Soybean | endoplasmic reticulum | 60.87 | 58.6 |
| PGSC0003DMT400002378 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 59.42 | 58.57 |
| Bra027911.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 60.87 | 58.33 |
| CDY39938 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 60.87 | 58.33 |
| KRH53215 | Soybean | endoplasmic reticulum | 59.42 | 58.02 |
| CDY31789 | Canola | plasma membrane | 59.9 | 57.67 |
| KRH64707 | Soybean | plasma membrane | 59.9 | 57.67 |
| CDY31078 | Canola | endoplasmic reticulum | 62.32 | 57.59 |
| CDY20688 | Canola | endoplasmic reticulum, golgi, nucleus | 62.32 | 57.59 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane, vacuole | 60.87 | 57.53 |
| Bra038147.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 59.42 | 57.21 |
| CDX93498 | Canola | endoplasmic reticulum, golgi, plasma membrane | 61.84 | 57.14 |
| CDY23801 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 58.94 | 56.74 |
| VIT_18s0001g03200.t01 | Wine grape | endoplasmic reticulum | 55.56 | 56.65 |
| AT1G21900.1 | Thale cress | plasma membrane | 58.94 | 56.48 |
| CDY50894 | Canola | endoplasmic reticulum, golgi, plasma membrane | 60.87 | 56.25 |
| CDY04681 | Canola | endoplasmic reticulum | 55.56 | 54.76 |
| PGSC0003DMT400045270 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 54.11 | 52.09 |
| KRH44035 | Soybean | endoplasmic reticulum, mitochondrion, plasma membrane | 61.35 | 51.63 |
| PGSC0003DMT400045273 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 52.17 | 51.43 |
| PGSC0003DMT400045277 | Potato | extracellular | 52.66 | 50.93 |
| CDX96570 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 57.0 | 50.64 |
| CDY38827 | Canola | endoplasmic reticulum, extracellular, vacuole | 56.52 | 49.16 |
| Solyc06g060450.2.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 50.72 | 48.84 |
| Solyc06g060440.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 50.24 | 48.83 |
| Bra016401.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 57.0 | 48.76 |
| KXG25366 | Sorghum | plasma membrane | 55.07 | 45.6 |
| CDY08168 | Canola | endoplasmic reticulum | 35.27 | 44.24 |
| Solyc06g060430.1.1 | Tomato | cytosol | 18.84 | 42.39 |
| EER92205 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 42.51 | 41.12 |
| GSMUA_Achr6P10010_001 | Banana | nucleus, peroxisome, plasma membrane | 60.39 | 39.31 |
| EER97600 | Sorghum | mitochondrion | 42.03 | 37.99 |
| Bra017957.1-P | Field mustard | endoplasmic reticulum, golgi, vacuole | 41.55 | 27.65 |
| OQU92664 | Sorghum | extracellular | 28.5 | 23.98 |
| OQU80774 | Sorghum | cytosol, plastid | 21.26 | 20.0 |
| OQU86595 | Sorghum | cytosol | 19.32 | 16.39 |
Protein Annotations
| MapMan:22.3.5.2 | EntrezGene:8078932 | UniProt:C5XSW7 | ncoils:Coil | EnsemblPlants:EES07590 | ProteinID:EES07590 |
| ProteinID:EES07590.1 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:GOLD_dom | InterPro:IPR009038 | PFAM:PF01105 | PFscan:PS50866 | PANTHER:PTHR22811 | PANTHER:PTHR22811:SF68 |
| SMART:SM01190 | EnsemblPlantsGene:SORBI_3004G310900 | unigene:Sbi.11036 | SignalP:SignalP-noTM | InterPro:TMP21-related | TMHMM:TMhelix |
| UniParc:UPI0001A86178 | RefSeq:XP_002454614.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:64740481..64743567
Molecular Weight (calculated)
22831.5 Da
IEP (calculated)
6.508
GRAVY (calculated)
0.205
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVALALAVA LAVASLHAEA VWLDVPQSGT KCVSEEIQSN VVVLADYSIM FESHPHSHPT IAVKVTSPYG NTLHHSENAT VGQFAFTTAE AGNYLACFWI
101: DSAEKGSGVS VNLDWKIGIA TKDWDAIAKK EKIEGVELEL RKLEVAVQAI HQNLIYLKER EAEMRTVSEA TNARVVWFST LALWVCIAVS VLQVWHLQGF
201: FRKKKLI
101: DSAEKGSGVS VNLDWKIGIA TKDWDAIAKK EKIEGVELEL RKLEVAVQAI HQNLIYLKER EAEMRTVSEA TNARVVWFST LALWVCIAVS VLQVWHLQGF
201: FRKKKLI
001: MKMTAKMRRE FPTAFLLLFL VPVMIPVGEA VWLDVPPTGT KCVSEEIQSN VVVLADYLII SEDHEVMPTI SVKVTSPYGN NLHNMENVTH GQFAFTTQES
101: GNYLACFWAD EKSHGNKNVS INIDWRTGIA AKDWASIAKK EKIEGVELEI RKLEGAVEAI HENILYLRNR EADMRTMSEK TNSRVAWYSI MSLGVCIAVS
201: GFQVLYLKQY FEKKKLI
101: GNYLACFWAD EKSHGNKNVS INIDWRTGIA AKDWASIAKK EKIEGVELEI RKLEGAVEAI HENILYLRNR EADMRTMSEK TNSRVAWYSI MSLGVCIAVS
201: GFQVLYLKQY FEKKKLI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta3 [Source:UniProtKB/Swiss-Prot;Acc:Q6IDL4]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.