Skip to main content
crop-pal logo
Potato
Search for another protein from :
Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 7
  • golgi 5
  • mitochondrion 1
  • plastid 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:mitochondrion, nucleus, plasma membrane, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc06g060430.1.1 Tomato cytosol 30.7 71.74
PGSC0003DMT400045273 Potato endoplasmic reticulum, extracellular, plasma membrane 66.05 67.62
PGSC0003DMT400045277 Potato extracellular 63.26 63.55
PGSC0003DMT400002378 Potato endoplasmic reticulum, extracellular, plasma membrane 60.93 62.38
TraesCS7A01G169500.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 52.09 57.73
TraesCS7D01G170400.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 51.16 56.7
PGSC0003DMT400061146 Potato extracellular 53.95 55.24
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, plasma membrane 55.35 55.09
GSMUA_Achr6P02320_001 Banana endoplasmic reticulum, plasma membrane 54.88 54.63
Os02t0768200-01 Rice endoplasmic reticulum, plasma membrane, vacuole 55.35 54.59
Os06t0210100-01 Rice plastid 53.02 54.55
Zm00001d037163_P002 Maize extracellular, plasma membrane 53.49 54.5
EES07590 Sorghum endoplasmic reticulum, extracellular, vacuole 52.09 54.11
KRH16308 Soybean endoplasmic reticulum 53.95 53.95
EER88046 Sorghum endoplasmic reticulum 53.49 53.74
KRH18772 Soybean plasma membrane 53.49 53.49
KRH53215 Soybean endoplasmic reticulum 52.09 52.83
KRH64707 Soybean plasma membrane 52.56 52.56
TraesCS7B01G074300.1 Wheat plasma membrane 52.09 51.85
TraesCS6B01G361000.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 50.7 51.66
TraesCS6A01G330200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 50.7 51.66
TraesCS5D01G242600.1 Wheat endoplasmic reticulum 50.23 51.43
TraesCS5B01G233900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 49.77 51.2
Zm00001d018194_P001 Maize extracellular 40.0 51.19
TraesCS6D01G309100.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 50.23 51.18
AT1G21900.1 Thale cress plasma membrane 51.16 50.93
Zm00001d005857_P001 Maize cytosol, golgi 37.67 50.31
VIT_18s0001g03200.t01 Wine grape endoplasmic reticulum 47.44 50.25
CDY04681 Canola endoplasmic reticulum 48.84 50.0
EER96837 Sorghum extracellular 48.37 50.0
TraesCS5A01G235500.1 Wheat extracellular, vacuole 48.84 50.0
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, vacuole 50.7 49.77
GSMUA_Achr3P20310_001 Banana plasma membrane 49.77 49.54
CDX96570 Canola endoplasmic reticulum, extracellular, plasma membrane 52.56 48.5
CDY38827 Canola endoplasmic reticulum, extracellular, vacuole 52.09 47.06
Os09t0453200-00 Rice endoplasmic reticulum, plasma membrane 46.05 46.7
Bra016401.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 52.56 46.69
HORVU5Hr1G067730.1 Barley cytosol, peroxisome 47.44 45.33
CDY08168 Canola endoplasmic reticulum 32.56 42.42
HORVU7Hr1G035390.1 Barley mitochondrion, plastid 52.56 41.24
Os08t0469400-00 Rice endoplasmic reticulum, extracellular, vacuole 24.65 38.69
KXG25366 Sorghum plasma membrane 42.79 36.8
GSMUA_Achr6P10010_001 Banana nucleus, peroxisome, plasma membrane 50.23 33.96
PGSC0003DMT400073002 Potato extracellular 33.49 33.8
PGSC0003DMT400062438 Potato mitochondrion 33.95 33.8
PGSC0003DMT400007416 Potato endoplasmic reticulum, extracellular, vacuole 32.56 32.71
Bra017957.1-P Field mustard endoplasmic reticulum, golgi, vacuole 33.49 23.15
Protein Annotations
EntrezGene:102596515MapMan:22.3.5.2GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005783GO:GO:0005789GO:GO:0016020GO:GO:0016021InterPro:GOLD_domInterPro:IPR009038
UniProt:M1BHD5PFAM:PF01105EnsemblPlantsGene:PGSC0003DMG400017561PGSC:PGSC0003DMG400017561EnsemblPlants:PGSC0003DMT400045270PFscan:PS50866
PANTHER:PTHR22811PANTHER:PTHR22811:SF76SMART:SM01190SignalP:SignalP-TMInterPro:TMP21-relatedTMHMM:TMhelix
UniParc:UPI000294F686RefSeq:XP_006363903.1SEG:seg:::
Description
Transmembrane emp24 domain-containing protein 10 [Source:PGSC_GENE;Acc:PGSC0003DMG400017561]
Coordinates
chr6:+:43387442..43389136
Molecular Weight (calculated)
24597.2 Da
IEP (calculated)
7.632
GRAVY (calculated)
0.015
Length
215 amino acids
Sequence
(BLAST)
001: MKLMEVLKVV VVVAMVMMMA VEAIWLELPN SETKCVYEDI RNNVVVLGEY IVIHADEEHV QANFIPTISV RVTSPFGNSL HHEENATYGR FAFTTSEHGN
101: YLACFRMNSH VPGNKNAAIS LQWKIGIDAR DWDSIARKEK IEGVELELMK LKGLAQAVHE NLLYLKKREE EMRGVSERTN GAVAWFSMMS LSICIMAAAV
201: QIWYLKRYFR KKTLI
Best Arabidopsis Sequence Match ( AT1G57620.1 )
(BLAST)
001: MKKKMIPTTI LLSALIFSLS PICEAVWLTV PHTGSKCVSE EIQSNVIVLA DYLVISEEHS IFPTVSVKVT APYGTVLHHR ENTTNGQFAF TTQESGTYLA
101: CFEADAKSHG NKDFSINIDW KTGIAAKDWD SIARKEKIEG VELEFKKLEG AVEAIHENLI YLRNREAEMR IVSEKTNSRV AWYSIMSLGI CIVVSGLQIL
201: YLKQYFEKKK LI
Arabidopsis Description
CYBTransmembrane emp24 domain-containing protein p24delta4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FVU0]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.