Factsheet for TraesCS7A01G169500.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
endoplasmic reticulum 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G170400.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	98.45	98.45
TraesCS7B01G074300.1	Wheat	plasma membrane	97.42	87.5
Os06t0210100-01	Rice	plastid	90.21	83.73
Zm00001d037163_P002	Maize	extracellular, plasma membrane	85.05	78.2
EER88046	Sorghum	endoplasmic reticulum	86.08	78.04
TraesCS6A01G330200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	79.9	73.46
KRH48283	Soybean	cytosol	28.35	71.43
GSMUA_Achr6P02320_001	Banana	endoplasmic reticulum, plasma membrane	76.8	68.98
HORVU7Hr1G035390.1	Barley	mitochondrion, plastid	97.42	68.98
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, plasma membrane	76.29	68.52
VIT_12s0034g01440.t01	Wine grape	endoplasmic reticulum, extracellular	72.68	65.28
KRH59179	Soybean	endoplasmic reticulum	70.1	64.45
GSMUA_Achr3P20310_001	Banana	plasma membrane	69.07	62.04
CDX95293	Canola	endoplasmic reticulum, extracellular, golgi	67.53	60.65
Bra027911.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	67.01	60.19
CDY39938	Canola	endoplasmic reticulum, extracellular, plasma membrane	67.01	60.19
AT1G09580.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	67.01	59.91
Solyc10g045640.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	65.98	59.81
CDY31789	Canola	plasma membrane	65.98	59.53
AT1G57620.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	64.95	59.43
VIT_18s0001g03200.t01	Wine grape	endoplasmic reticulum	61.86	59.11
KRH18772	Soybean	plasma membrane	65.46	59.07
Solyc01g104220.2.1	Tomato	endoplasmic reticulum	64.43	58.96
AT1G21900.1	Thale cress	plasma membrane	65.46	58.8
KRH16308	Soybean	endoplasmic reticulum	64.95	58.6
Solyc11g013000.1.1	Tomato	plastid	63.4	58.57
PGSC0003DMT400002378	Potato	endoplasmic reticulum, extracellular, plasma membrane	63.4	58.57
KRH43057	Soybean	extracellular	46.91	58.33
Bra030786.1-P	Field mustard	extracellular	63.4	58.29
Bra038147.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	64.43	58.14
TraesCS5A01G235500.1	Wheat	extracellular, vacuole	62.89	58.1
CDY23801	Canola	endoplasmic reticulum, extracellular, plasma membrane	63.92	57.67
PGSC0003DMT400061146	Potato	extracellular	62.37	57.62
KRH53215	Soybean	endoplasmic reticulum	62.89	57.55
Bra020010.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	62.89	57.55
KRH64707	Soybean	plasma membrane	63.4	57.21
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, vacuole	64.43	57.08
KRH10436	Soybean	endoplasmic reticulum	62.37	56.28
CDY20688	Canola	endoplasmic reticulum, golgi, nucleus	63.4	54.91
CDY31078	Canola	endoplasmic reticulum	63.4	54.91
CDY04681	Canola	endoplasmic reticulum	59.28	54.76
CDX93498	Canola	endoplasmic reticulum, golgi, plasma membrane	62.89	54.46
CDY50894	Canola	endoplasmic reticulum, golgi, plasma membrane	62.37	54.02
PGSC0003DMT400045270	Potato	endoplasmic reticulum, extracellular, plasma membrane	57.73	52.09
KRH44035	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane	64.95	51.22
CDX96570	Canola	endoplasmic reticulum, extracellular, plasma membrane	60.82	50.64
PGSC0003DMT400045273	Potato	endoplasmic reticulum, extracellular, plasma membrane	53.61	49.52
CDY38827	Canola	endoplasmic reticulum, extracellular, vacuole	60.31	49.16
Bra016401.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	60.82	48.76
PGSC0003DMT400045277	Potato	extracellular	53.09	48.13
Solyc06g060440.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	52.06	47.42
Solyc06g060450.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	52.06	46.98
CDY08168	Canola	endoplasmic reticulum	39.18	46.06
Solyc06g060430.1.1	Tomato	cytosol	21.65	45.65
TraesCS2A01G155600.1	Wheat	golgi	46.91	39.91
GSMUA_Achr6P10010_001	Banana	nucleus, peroxisome, plasma membrane	63.92	38.99
Bra017957.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	41.24	25.72

Protein Annotations

EnsemblPlants:TraesCS7A01G169500.1	EnsemblPlantsGene:TraesCS7A01G169500	InterPro:GOLD_dom	InterPro:IPR009038	InterPro:TMP21-related	ncoils:Coil
PANTHER:PTHR22811	PANTHER:PTHR22811:SF68	PFAM:PF01105	PFscan:PS50866	SEG:seg	SMART:SM01190
TMHMM:TMhelix	MapMan:22.3.5.2	:	:	:	:

Description

No Description!

Coordinates

chr7A:-:126049167..126051497

Molecular Weight (calculated)

21479.8 Da

IEP (calculated)

6.152

GRAVY (calculated)

0.029

Length

194 amino acids

Sequence
(BLAST)

001: MMLGSEAVWL DLPPSGTKCV SEEIQPNVVV VADYMLMYEA HATAHPTVAV KVTSPYGNTV HHKENATVGQ FAFTTSEAGN YLACFWLDSA EKGSGVSLNL
101: DWKIGIATKD WDSVAKKEKI EGVELELAKL EAAVESIHHN LLYLKAREAE MREVSEKTNS RVAWFSILSL GVCIVVSALQ LWHLQGFFQK KKLI

Best Arabidopsis Sequence Match ( AT1G09580.1 )
(BLAST)

001: MKMTAKMRRE FPTAFLLLFL VPVMIPVGEA VWLDVPPTGT KCVSEEIQSN VVVLADYLII SEDHEVMPTI SVKVTSPYGN NLHNMENVTH GQFAFTTQES
101: GNYLACFWAD EKSHGNKNVS INIDWRTGIA AKDWASIAKK EKIEGVELEI RKLEGAVEAI HENILYLRNR EADMRTMSEK TNSRVAWYSI MSLGVCIAVS
201: GFQVLYLKQY FEKKKLI

Arabidopsis Description

Transmembrane emp24 domain-containing protein p24delta3 [Source:UniProtKB/Swiss-Prot;Acc:Q6IDL4]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.