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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 6
  • plastid 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, golgi
Any Predictor:nucleus, plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus, plasma membrane, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX93498 Canola endoplasmic reticulum, golgi, plasma membrane 100.0 94.64
Bra030786.1-P Field mustard extracellular 81.6 81.99
AT1G09580.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 81.13 79.26
KRH48283 Soybean cytosol 25.94 71.43
Bra038147.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 68.87 67.91
Bra027911.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 68.4 67.13
KRH59179 Soybean endoplasmic reticulum 63.21 63.51
TraesCS7A01G169500.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 57.55 62.89
TraesCS7D01G170400.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 57.55 62.89
EES07590 Sorghum endoplasmic reticulum, extracellular, vacuole 60.38 61.84
Os06t0210100-01 Rice plastid 60.85 61.72
Zm00001d037163_P002 Maize extracellular, plasma membrane 61.32 61.61
VIT_12s0034g01440.t01 Wine grape endoplasmic reticulum, extracellular 62.26 61.11
TraesCS6B01G361000.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 60.38 60.66
TraesCS6D01G309100.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 59.91 60.19
TraesCS6A01G330200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 59.91 60.19
EER88046 Sorghum endoplasmic reticulum 60.38 59.81
GSMUA_Achr6P02320_001 Banana endoplasmic reticulum, plasma membrane 60.85 59.72
Solyc10g045640.1.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 59.91 59.35
Os02t0768200-01 Rice endoplasmic reticulum, plasma membrane, vacuole 60.85 59.17
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, plasma membrane 59.91 58.8
Zm00001d018194_P001 Maize extracellular 46.23 58.33
TraesCS7B01G074300.1 Wheat plasma membrane 59.43 58.33
KRH43057 Soybean extracellular 42.45 57.69
Solyc01g104220.2.1 Tomato endoplasmic reticulum 57.08 57.08
KRH10436 Soybean endoplasmic reticulum 57.55 56.74
PGSC0003DMT400061146 Potato extracellular 56.13 56.67
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, vacuole 58.49 56.62
GSMUA_Achr3P20310_001 Banana plasma membrane 56.13 55.09
TraesCS5B01G233900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 54.25 55.02
EER96837 Sorghum extracellular 53.77 54.81
TraesCS5D01G242600.1 Wheat endoplasmic reticulum 53.3 53.81
TraesCS5A01G235500.1 Wheat extracellular, vacuole 53.3 53.81
Zm00001d005857_P001 Maize cytosol, golgi 40.57 53.42
Os09t0453200-00 Rice endoplasmic reticulum, plasma membrane 51.89 51.89
Os08t0469400-00 Rice endoplasmic reticulum, extracellular, vacuole 33.02 51.09
Bra016401.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 57.08 50.0
HORVU5Hr1G067730.1 Barley cytosol, peroxisome 52.83 49.78
KRH44035 Soybean endoplasmic reticulum, mitochondrion, plasma membrane 57.08 49.19
Bra001380.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 47.64 46.54
Bra034146.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 42.45 45.69
HORVU7Hr1G035390.1 Barley mitochondrion, plastid 58.96 45.62
Bra029868.1-P Field mustard plasma membrane 43.4 43.81
KXG25366 Sorghum plasma membrane 49.53 42.0
GSMUA_Achr6P10010_001 Banana nucleus, peroxisome, plasma membrane 57.08 38.05
Bra026866.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 37.26 37.26
Bra024694.1-P Field mustard endoplasmic reticulum, plasma membrane 37.26 36.92
Bra004382.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 37.26 36.74
Bra036221.1-P Field mustard endoplasmic reticulum, extracellular 35.38 34.72
Bra024781.1-P Field mustard endoplasmic reticulum, extracellular 33.96 33.64
Bra033081.1-P Field mustard golgi, plasma membrane, plastid 34.43 32.88
Bra026559.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 33.49 32.87
Bra016283.1-P Field mustard endoplasmic reticulum 33.02 32.71
Bra016715.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 27.83 29.35
Bra017957.1-P Field mustard endoplasmic reticulum, golgi, vacuole 37.74 25.72
Protein Annotations
MapMan:22.3.5.2EnsemblPlantsGene:Bra020010EnsemblPlants:Bra020010.1EnsemblPlants:Bra020010.1-Pncoils:CoilGO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020
GO:GO:0016021InterPro:GOLD_domInterPro:IPR009038UniProt:M4DU17PFAM:PF01105PFscan:PS50866
PANTHER:PTHR22811PANTHER:PTHR22811:SF76SMART:SM01190SignalP:SignalP-noTMInterPro:TMP21-relatedTMHMM:TMhelix
UniParc:UPI000253E8BE:::::
Description
AT1G09580 (E=9e-096) | emp24/gp25L/p24 family protein
Coordinates
chrA06:+:3294561..3295974
Molecular Weight (calculated)
23559.6 Da
IEP (calculated)
7.500
GRAVY (calculated)
0.017
Length
212 amino acids
Sequence
(BLAST)
001: MAAKKIQHGL LTAFLLLILV PVGEAVWLDV PTTGTKCVSE EIQSNVVVLA DYIIISEDDS LLPTISVKVT SPYGKNLHQM ENVTVGEFAF TTQESGNYMA
101: CFTADTKSHG NKNVSISVDW KTGIAAKDWK NIAKKEKIEG VELEIRKLEA AVEAIHENLV YIRNKEADMR TVSEKTNSRV AWFSTMSMGI CIAVSGIQVV
201: YLKQYFQKKK LI
Best Arabidopsis Sequence Match ( AT1G09580.1 )
(BLAST)
001: MKMTAKMRRE FPTAFLLLFL VPVMIPVGEA VWLDVPPTGT KCVSEEIQSN VVVLADYLII SEDHEVMPTI SVKVTSPYGN NLHNMENVTH GQFAFTTQES
101: GNYLACFWAD EKSHGNKNVS INIDWRTGIA AKDWASIAKK EKIEGVELEI RKLEGAVEAI HENILYLRNR EADMRTMSEK TNSRVAWYSI MSLGVCIAVS
201: GFQVLYLKQY FEKKKLI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta3 [Source:UniProtKB/Swiss-Prot;Acc:Q6IDL4]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.