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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:
  • plastid 2
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 4
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:nucleus, plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus, plasma membrane, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY09334 Canola endoplasmic reticulum, extracellular, vacuole 99.07 99.07
CDY53680 Canola endoplasmic reticulum, extracellular, vacuole 94.91 94.91
Bra026866.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 71.76 73.11
Bra024781.1-P Field mustard endoplasmic reticulum, extracellular 70.83 71.5
AT2G03290.1 Thale cress extracellular 69.44 70.42
AT2G03040.1 Thale cress extracellular 49.54 64.46
Bra024694.1-P Field mustard endoplasmic reticulum, plasma membrane 59.72 60.28
GSMUA_Achr1P21760_001 Banana cytosol 46.76 59.76
GSMUA_AchrUn_... Banana cytosol 46.3 59.17
Bra016715.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 54.63 58.71
Bra016283.1-P Field mustard endoplasmic reticulum 57.41 57.94
PGSC0003DMT400007416 Potato endoplasmic reticulum, extracellular, vacuole 56.94 57.48
Bra004382.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 56.48 56.74
VIT_01s0182g00030.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 55.09 56.13
Solyc04g005570.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 55.56 55.81
KRH50555 Soybean endoplasmic reticulum 56.94 55.66
KRG89554 Soybean endoplasmic reticulum 54.63 53.64
Solyc05g013130.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 51.85 52.58
PGSC0003DMT400073002 Potato extracellular 51.85 52.58
EER92205 Sorghum endoplasmic reticulum, extracellular, plasma membrane 51.85 52.34
Bra033081.1-P Field mustard golgi, plasma membrane, plastid 53.24 51.8
Solyc01g010940.2.1 Tomato nucleus, plastid 51.39 51.39
PGSC0003DMT400062438 Potato mitochondrion 51.39 51.39
Bra036221.1-P Field mustard endoplasmic reticulum, extracellular 50.93 50.93
Os07t0632700-01 Rice plasma membrane 52.78 49.57
TraesCS2B01G180800.1 Wheat mitochondrion 52.31 49.56
TraesCS2D01G161400.1 Wheat endoplasmic reticulum, plastid 51.85 49.12
TraesCS2A01G155600.1 Wheat golgi 51.39 48.68
Zm00001d022238_P001 Maize mitochondrion 50.93 48.03
HORVU2Hr1G028220.5 Barley endoplasmic reticulum, extracellular 51.39 47.84
EER97600 Sorghum mitochondrion 50.46 47.6
Zm00001d006951_P001 Maize mitochondrion 50.0 47.16
Os03t0376000-01 Rice endoplasmic reticulum, plasma membrane 50.46 46.98
KRH70789 Soybean cytosol, vacuole 15.28 45.21
KRH70788 Soybean extracellular 27.78 41.96
Bra030786.1-P Field mustard extracellular 34.72 35.55
Zm00001d047163_P001 Maize endoplasmic reticulum, extracellular, vacuole 40.74 35.48
Bra001380.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 33.8 33.64
Bra020010.1-P Field mustard endoplasmic reticulum, extracellular, golgi 32.87 33.49
Bra038147.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 32.41 32.56
Bra027911.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 31.94 31.94
Bra016401.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 35.65 31.82
Bra029868.1-P Field mustard plasma membrane 30.09 30.95
Bra034146.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 26.85 29.44
Bra017957.1-P Field mustard endoplasmic reticulum, golgi, vacuole 24.54 17.04
Protein Annotations
MapMan:22.3.5.2EnsemblPlantsGene:Bra026559EnsemblPlants:Bra026559.1EnsemblPlants:Bra026559.1-PGO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020GO:GO:0016021
InterPro:GOLD_domInterPro:IPR009038UniProt:M4ECP9PFAM:PF01105PFscan:PS50866PANTHER:PTHR22811
PANTHER:PTHR22811:SF47SMART:SM01190SignalP:SignalP-noTMInterPro:TMP21-relatedTMHMM:TMhelixUniParc:UPI00025466DB
Description
AT2G03290 (E=7e-083) | protein transmembrane transporter
Coordinates
chrA02:-:20219107..20220206
Molecular Weight (calculated)
24668.8 Da
IEP (calculated)
6.948
GRAVY (calculated)
-0.174
Length
216 amino acids
Sequence
(BLAST)
001: MDLLRQSLGC LLIVASLSPT ALSMQFELRS GQMKCISEDI HEKSISVGKY FVVNPNEDHP LPDSHKITAK MVSPKWNTLH EAVKVEAGEF SFTAFETGDY
101: FTCISAVDHK PETTLTIDFV WMSGVHSAAS KDWSKVPKRS QVKMMELSVK RLFDTVESIH DEMYYLRDRE AEMQELNRST NSKMAWFSFL SLGVCLSVAG
201: LQFWHLKSFF EKKKLI
Best Arabidopsis Sequence Match ( AT2G03290.1 )
(BLAST)
001: MDLCRSSILL LIIALLSPRT LSMRYELKSS KTKCIGEEIH ENAMSIGKYF IVNPNEDNHP LPDSHKIIVK VMPPQGKNLH EADKVEAGQF SFTAYENGSY
101: VACITAIDYK PETTLTIDFD WKTGVHSKEW TNVAKKSQVD MMEYQVKTLM DTVISIHEEM YYLREREEEM QELNRSTNSK MAWLSFGSLV VCLSVAGLQF
201: WHLKTFFEKK KLI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta8 [Source:UniProtKB/Swiss-Prot;Acc:O81045]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.