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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 1
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 5
  • golgi 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:mitochondrion
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
 endoplasmic reticulum: 27224218
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH50555 Soybean endoplasmic reticulum 93.64 93.21
VIT_01s0182g00030.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 69.09 71.7
CDY37184 Canola endoplasmic reticulum, peroxisome, plastid 15.45 68.0
GSMUA_AchrUn_... Banana cytosol 51.82 67.46
GSMUA_Achr1P21760_001 Banana cytosol 51.36 66.86
PGSC0003DMT400073002 Potato extracellular 63.64 65.73
AT1G26690.1 Thale cress endoplasmic reticulum, extracellular, vacuole 63.64 65.42
PGSC0003DMT400007416 Potato endoplasmic reticulum, extracellular, vacuole 63.64 65.42
Solyc05g013130.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 63.18 65.26
Solyc04g005570.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 62.27 63.72
CDY33785 Canola endoplasmic reticulum, extracellular, plasma membrane 61.36 63.68
Bra026866.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 61.36 63.68
CDY16125 Canola endoplasmic reticulum, extracellular, plasma membrane 60.91 63.21
AT1G69460.1 Thale cress endoplasmic reticulum, extracellular, vacuole 61.36 63.08
CDY16181 Canola endoplasmic reticulum, plasma membrane, vacuole 60.91 62.62
CDX95934 Canola vacuole 60.91 62.33
Bra024694.1-P Field mustard endoplasmic reticulum, plasma membrane 60.45 62.15
CDX96872 Canola endoplasmic reticulum, extracellular, plasma membrane 60.0 61.97
CDY62212 Canola endoplasmic reticulum, extracellular, plasma membrane 60.0 61.97
Bra004382.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 60.45 61.86
KRH13540 Soybean cytosol 21.82 61.54
CDY40925 Canola endoplasmic reticulum 60.0 61.4
CDX85047 Canola endoplasmic reticulum 59.55 61.22
KRH18453 Soybean golgi, plasma membrane, vacuole 60.0 61.11
AT1G14010.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 58.64 60.85
PGSC0003DMT400062438 Potato mitochondrion 59.55 60.65
KRG93569 Soybean endoplasmic reticulum, extracellular, plasma membrane 59.55 60.65
TraesCS2A01G155600.1 Wheat golgi 62.73 60.53
Solyc01g010940.2.1 Tomato nucleus, plastid 59.09 60.19
TraesCS2B01G180800.1 Wheat mitochondrion 61.82 59.65
AT2G03290.1 Thale cress extracellular 57.73 59.62
KRH70789 Soybean cytosol, vacuole 19.55 58.9
TraesCS2D01G161400.1 Wheat endoplasmic reticulum, plastid 60.91 58.77
KRH70788 Soybean extracellular 38.18 58.74
EER92205 Sorghum endoplasmic reticulum, extracellular, plasma membrane 56.82 58.41
Os07t0632700-01 Rice plasma membrane 60.45 57.83
HORVU2Hr1G028220.5 Barley endoplasmic reticulum, extracellular 60.91 57.76
CDY24142 Canola endoplasmic reticulum, plasma membrane, vacuole 55.91 57.48
CDY61620 Canola endoplasmic reticulum 55.91 57.48
Bra016283.1-P Field mustard endoplasmic reticulum 55.91 57.48
CDY03005 Canola endoplasmic reticulum, extracellular, plasma membrane 55.45 57.01
Zm00001d022238_P001 Maize mitochondrion 58.64 56.33
Os03t0376000-01 Rice endoplasmic reticulum, plasma membrane 59.09 56.03
KRH01218 Soybean endoplasmic reticulum, plasma membrane, vacuole 55.45 55.96
Bra024781.1-P Field mustard endoplasmic reticulum, extracellular 54.09 55.61
CDY45170 Canola endoplasmic reticulum, extracellular 54.09 55.61
EER97600 Sorghum mitochondrion 57.73 55.46
Bra026559.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 53.64 54.63
CDY53680 Canola endoplasmic reticulum, extracellular, vacuole 53.64 54.63
CDY09334 Canola endoplasmic reticulum, extracellular, vacuole 53.64 54.63
Zm00001d006951_P001 Maize mitochondrion 56.82 54.59
AT2G03040.1 Thale cress extracellular 40.45 53.61
Bra016715.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 46.82 51.24
KRH48283 Soybean cytosol 15.0 42.86
Zm00001d047163_P001 Maize endoplasmic reticulum, extracellular, vacuole 46.82 41.53
KRH16308 Soybean endoplasmic reticulum 40.45 41.4
KRH53215 Soybean endoplasmic reticulum 39.55 41.04
KRH18772 Soybean plasma membrane 40.0 40.93
KRH64707 Soybean plasma membrane 39.09 40.0
KRH59179 Soybean endoplasmic reticulum 36.36 37.91
KRH10436 Soybean endoplasmic reticulum 36.82 37.67
KRH43057 Soybean extracellular 24.09 33.97
KRH44035 Soybean endoplasmic reticulum, mitochondrion, plasma membrane 37.73 33.74
Protein Annotations
EntrezGene:100499866MapMan:22.3.5.2EMBL:ACUP02012216EMBL:BT089892UniProt:C6SXJ7ncoils:Coil
EnsemblPlantsGene:GLYMA_20G031400GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783
GO:GO:0005789GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021InterPro:GOLD_dom
InterPro:IPR009038EnsemblPlants:KRG89554ProteinID:KRG89554ProteinID:KRG89554.1PFAM:PF01105PFscan:PS50866
PANTHER:PTHR22811PANTHER:PTHR22811:SF47SMART:SM01190SignalP:SignalP-noTMInterPro:TMP21-relatedTMHMM:TMhelix
UniParc:UPI0001B15369SEG:seg::::
Description
hypothetical protein
Coordinates
chr20:-:3849177..3852257
Molecular Weight (calculated)
25164.3 Da
IEP (calculated)
6.396
GRAVY (calculated)
-0.164
Length
220 amino acids
Sequence
(BLAST)
001: MIMIMMGSNP KPLVHLSLLL LVLFSSSTES LRFEIQSGHT KCISEDIKSN SMTVGKYQIV SPNEGQPLPD AHRFTVRVTS SYGNNYHYGD RVQTGQFAFA
101: AVEAGDYMTC FWAVDHNPVE TLTVDFDWKT GVAAKDWSNV AKKGQVDVME LELKKLQDTV SSIHEEMFYL REKEEEMQEL NRTTSSRMFW LSLLSLFVCL
201: SVAGMQIWHL KTFFEKKKLI
Best Arabidopsis Sequence Match ( AT1G26690.1 )
(BLAST)
001: MFLRSLNLCT ILLFLAISSQ VSQSLHFELQ SGRTKCISED IKSNSMTVGK YTVVNPNEAH PSPQSHKISI RVTSSYGNTY HHAEDVESGQ FAFTAVESGD
101: YMACYTAVDH KPEVTLSIDF DWRTGVQSKS WSSVAKKSQV EVMEFDVKRL IETVNSIHEE MFYLREREEE MQNLNRATNS KMAWLSFLSL FVCLGVAGMQ
201: FVHLKTFFEK KKVI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQY3]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.