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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 5
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY33785 Canola endoplasmic reticulum, extracellular, plasma membrane 98.11 98.11
CDX96872 Canola endoplasmic reticulum, extracellular, plasma membrane 90.09 89.67
CDY62212 Canola endoplasmic reticulum, extracellular, plasma membrane 89.62 89.2
AT1G14010.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 85.38 85.38
CDY37184 Canola endoplasmic reticulum, peroxisome, plastid 19.81 84.0
CDY03005 Canola endoplasmic reticulum, extracellular, plasma membrane 71.7 71.03
CDY45170 Canola endoplasmic reticulum, extracellular 71.23 70.56
CDY09334 Canola endoplasmic reticulum, extracellular, vacuole 71.7 70.37
CDY53680 Canola endoplasmic reticulum, extracellular, vacuole 70.75 69.44
GSMUA_Achr1P21760_001 Banana cytosol 51.42 64.5
CDY16181 Canola endoplasmic reticulum, plasma membrane, vacuole 64.15 63.55
CDX85047 Canola endoplasmic reticulum 63.68 63.08
GSMUA_AchrUn_... Banana cytosol 50.0 62.72
KRH50555 Soybean endoplasmic reticulum 65.09 62.44
CDX95934 Canola vacuole 62.74 61.86
CDY40925 Canola endoplasmic reticulum 62.74 61.86
VIT_01s0182g00030.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 61.79 61.79
CDY61620 Canola endoplasmic reticulum 62.26 61.68
KRG89554 Soybean endoplasmic reticulum 63.21 60.91
CDY24142 Canola endoplasmic reticulum, plasma membrane, vacuole 61.32 60.75
PGSC0003DMT400007416 Potato endoplasmic reticulum, extracellular, vacuole 60.38 59.81
PGSC0003DMT400062438 Potato mitochondrion 60.38 59.26
Solyc04g005570.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 59.91 59.07
PGSC0003DMT400073002 Potato extracellular 58.96 58.69
Solyc05g013130.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 58.96 58.69
Solyc01g010940.2.1 Tomato nucleus, plastid 58.49 57.41
CDY00102 Canola cytosol 44.81 56.21
EER92205 Sorghum endoplasmic reticulum, extracellular, plasma membrane 55.19 54.67
Os07t0632700-01 Rice plasma membrane 58.49 53.91
TraesCS2B01G180800.1 Wheat mitochondrion 57.08 53.07
Zm00001d022238_P001 Maize mitochondrion 57.08 52.84
TraesCS2D01G161400.1 Wheat endoplasmic reticulum, plastid 56.6 52.63
EER97600 Sorghum mitochondrion 56.6 52.4
TraesCS2A01G155600.1 Wheat golgi 56.13 52.19
Zm00001d006951_P001 Maize mitochondrion 55.66 51.53
CDY44411 Canola golgi, plasma membrane, plastid 53.77 51.35
HORVU2Hr1G028220.5 Barley endoplasmic reticulum, extracellular 55.66 50.86
KRH70789 Soybean cytosol, vacuole 17.45 50.68
CDY04053 Canola endoplasmic reticulum 53.3 50.67
CDY19998 Canola endoplasmic reticulum, extracellular 51.42 50.46
CDX85243 Canola mitochondrion 52.83 50.45
Os03t0376000-01 Rice endoplasmic reticulum, plasma membrane 54.72 50.0
KRH70788 Soybean extracellular 33.49 49.65
Zm00001d047163_P001 Maize endoplasmic reticulum, extracellular, vacuole 45.75 39.11
CDY04681 Canola endoplasmic reticulum 37.74 38.1
CDX96570 Canola endoplasmic reticulum, extracellular, plasma membrane 40.09 36.48
CDX93498 Canola endoplasmic reticulum, golgi, plasma membrane 38.21 36.16
CDX73903 Canola endoplasmic reticulum, extracellular, plasma membrane 35.38 36.06
CDX73906 Canola endoplasmic reticulum, extracellular, plasma membrane 35.38 36.06
CDY00701 Canola plasma membrane 35.38 36.06
CDY08577 Canola plasma membrane 35.38 35.71
CDY50894 Canola endoplasmic reticulum, golgi, plasma membrane 37.74 35.71
CDY00971 Canola plasma membrane 35.38 35.71
CDY38827 Canola endoplasmic reticulum, extracellular, vacuole 39.62 35.29
CDY31078 Canola endoplasmic reticulum 36.79 34.82
CDY20688 Canola endoplasmic reticulum, golgi, nucleus 36.79 34.82
CDY08168 Canola endoplasmic reticulum 26.89 34.55
CDX95293 Canola endoplasmic reticulum, extracellular, golgi 34.91 34.26
CDY39938 Canola endoplasmic reticulum, extracellular, plasma membrane 34.91 34.26
CDY36275 Canola endoplasmic reticulum, extracellular, plasma membrane 31.6 34.01
CDY31789 Canola plasma membrane 34.43 33.95
CDY23801 Canola endoplasmic reticulum, extracellular, plasma membrane 33.96 33.49
Protein Annotations
MapMan:22.3.5.2GO:A0A078FNV7UniProt:A0A078FNV7EnsemblPlants:CDY16125ProteinID:CDY16125ProteinID:CDY16125.1
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789
GO:GO:0016020GO:GO:0016021InterPro:GOLD_domEnsemblPlantsGene:GSBRNA2T00090549001InterPro:IPR009038PFAM:PF01105
PFscan:PS50866PANTHER:PTHR22811PANTHER:PTHR22811:SF47SMART:SM01190SignalP:SignalP-noTMInterPro:TMP21-related
TMHMM:TMhelixUniParc:UPI0004EE15FBSEG:seg:::
Description
BnaC08g39980DBnaC08g39980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FNV7]
Coordinates
chrLK032060:-:749345..750336
Molecular Weight (calculated)
24181.0 Da
IEP (calculated)
6.508
GRAVY (calculated)
-0.241
Length
212 amino acids
Sequence
(BLAST)
001: MDHRRSSIVL LILSILSPAT LSMRYELLSG HTKCISEEIH ANAMSVGKYS IVNPNEDHPL PDSHKITVRV TSPQGTAYHE ADGVSTGQFS LTAVETGDYI
101: TCISAVDHKP ETMMTIDFDW RSGIHTKDWS NVAKKSQVEM MEFEVKKLFD TVTSIHDEMF YLRDREEEMQ ELNRATNTKM AWFSFLSLGV CLSVAGLQFW
201: HLKTFFQKKK LI
Best Arabidopsis Sequence Match ( AT1G14010.1 )
(BLAST)
001: MNHRRSSIVL LILSILSPVT LSIRYELLSG HTKCISEEIH ANAMTIGKYS IINPHEDHPL PSSHKVTVRV TSPQGTAYHE SDGVESGQFS FVAVETGDYI
101: SCFSAVDHKP ETTLIIDFDW RTGIHTKDWS NVAKKSQVET MEFEVKKLFE TVNGIHDEMF YLRDREEEMH NLNIATNSKM AWLSFVSLAV CLSVAGLQFW
201: HLKTFFQKKK LI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta7 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYG1]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.