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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 2
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
TargetP:secretory
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G180800.1 Wheat mitochondrion 90.95 92.54
TraesCS2D01G161400.1 Wheat endoplasmic reticulum, plastid 90.09 91.67
TraesCS2A01G155600.1 Wheat golgi 89.66 91.23
Zm00001d022238_P001 Maize mitochondrion 79.74 80.79
Zm00001d006951_P001 Maize mitochondrion 79.31 80.35
EER97600 Sorghum mitochondrion 79.31 80.35
Os07t0632700-01 Rice plasma membrane 78.02 78.7
GSMUA_Achr1P21760_001 Banana cytosol 54.31 74.56
GSMUA_AchrUn_... Banana cytosol 53.88 73.96
CDY37184 Canola endoplasmic reticulum, peroxisome, plastid 14.66 68.0
VIT_14s0108g01140.t01 Wine grape extracellular 58.62 64.76
VIT_01s0182g00030.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 59.05 64.62
KRH50555 Soybean endoplasmic reticulum 59.91 62.9
KRH13540 Soybean cytosol 20.69 61.54
KRG89554 Soybean endoplasmic reticulum 57.76 60.91
KRG93569 Soybean endoplasmic reticulum, extracellular, plasma membrane 55.17 59.26
CDY00102 Canola cytosol 43.1 59.17
KRH18453 Soybean golgi, plasma membrane, vacuole 54.74 58.8
PGSC0003DMT400007416 Potato endoplasmic reticulum, extracellular, vacuole 53.88 58.41
Solyc04g005570.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 53.45 57.67
PGSC0003DMT400073002 Potato extracellular 52.59 57.28
AT1G26690.1 Thale cress endoplasmic reticulum, extracellular, vacuole 52.16 56.54
CDY33785 Canola endoplasmic reticulum, extracellular, plasma membrane 51.29 56.13
Bra026866.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 51.29 56.13
Solyc05g013130.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 51.29 55.87
CDY16125 Canola endoplasmic reticulum, extracellular, plasma membrane 50.86 55.66
PGSC0003DMT400062438 Potato mitochondrion 51.29 55.09
KRH70789 Soybean cytosol, vacuole 17.24 54.79
CDX85047 Canola endoplasmic reticulum 50.43 54.67
Solyc01g010940.2.1 Tomato nucleus, plastid 50.86 54.63
CDY16181 Canola endoplasmic reticulum, plasma membrane, vacuole 50.0 54.21
Bra024694.1-P Field mustard endoplasmic reticulum, plasma membrane 49.57 53.74
CDY62212 Canola endoplasmic reticulum, extracellular, plasma membrane 49.14 53.52
CDX96872 Canola endoplasmic reticulum, extracellular, plasma membrane 49.14 53.52
Bra004382.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 49.57 53.49
AT1G14010.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 48.71 53.3
CDY19998 Canola endoplasmic reticulum, extracellular 49.57 53.24
Bra036221.1-P Field mustard endoplasmic reticulum, extracellular 49.57 53.24
CDX95934 Canola vacuole 49.14 53.02
AT2G03290.1 Thale cress extracellular 48.28 52.58
CDY40925 Canola endoplasmic reticulum 48.71 52.56
KRH70788 Soybean extracellular 32.33 52.45
Bra024781.1-P Field mustard endoplasmic reticulum, extracellular 48.28 52.34
AT1G69460.1 Thale cress endoplasmic reticulum, extracellular, vacuole 48.28 52.34
CDY45170 Canola endoplasmic reticulum, extracellular 48.28 52.34
CDX85243 Canola mitochondrion 50.0 52.25
CDY04053 Canola endoplasmic reticulum 50.0 52.02
CDY03005 Canola endoplasmic reticulum, extracellular, plasma membrane 47.84 51.87
Bra033081.1-P Field mustard golgi, plasma membrane, plastid 49.57 51.8
CDY44411 Canola golgi, plasma membrane, plastid 49.57 51.8
CDY09334 Canola endoplasmic reticulum, extracellular, vacuole 47.84 51.39
CDY53680 Canola endoplasmic reticulum, extracellular, vacuole 47.84 51.39
Bra026559.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 47.84 51.39
CDY61620 Canola endoplasmic reticulum 46.55 50.47
Bra016283.1-P Field mustard endoplasmic reticulum 46.55 50.47
KRH01218 Soybean endoplasmic reticulum, plasma membrane, vacuole 46.55 49.54
CDY24142 Canola endoplasmic reticulum, plasma membrane, vacuole 45.69 49.53
AT3G29070.1 Thale cress mitochondrion 47.41 48.89
AT2G03040.1 Thale cress extracellular 33.19 46.39
Bra016715.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 36.21 41.79
HORVU5Hr1G067730.1 Barley cytosol, peroxisome 33.62 34.67
HORVU7Hr1G035390.1 Barley mitochondrion, plastid 39.66 33.58
Protein Annotations
MapMan:22.3.5.2UniProt:A0A287HI02ncoils:CoilGO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020GO:GO:0016021InterPro:GOLD_dom
EnsemblPlantsGene:HORVU2Hr1G028220EnsemblPlants:HORVU2Hr1G028220.5InterPro:IPR009038PFAM:PF01105PFscan:PS50866PANTHER:PTHR22811
PANTHER:PTHR22811:SF112SMART:SM01190SignalP:SignalP-noTMInterPro:TMP21-relatedTMHMM:TMhelixUniParc:UPI000B46C592
SEG:seg:::::
Description
No Description!
Coordinates
chrchr2H:+:94905274..94908129
Molecular Weight (calculated)
25906.1 Da
IEP (calculated)
6.507
GRAVY (calculated)
-0.169
Length
232 amino acids
Sequence
(BLAST)
001: PAPRCLPPSA LLLLAAVLFA SSPSARALRF DLESGHTKCI SDEIKVDSMA VGKYSVVGPD PSYPDAQLPD SHRHGDPVIS LICAVGLTQV TSPYGNSMHY
101: SENVQSGHFA FTAVEAGDYL ACFWAPDHKP PVTVTFEFDW KSGVTAKDWS NVAKKGKVDM MELELKKLED TIKAIHEEMF YLREREEEMQ NINRQTNSRM
201: GWLSFLSLGI CLSVAGLQLW HLKTFFERKK LL
Best Arabidopsis Sequence Match ( AT1G26690.1 )
(BLAST)
001: MFLRSLNLCT ILLFLAISSQ VSQSLHFELQ SGRTKCISED IKSNSMTVGK YTVVNPNEAH PSPQSHKISI RVTSSYGNTY HHAEDVESGQ FAFTAVESGD
101: YMACYTAVDH KPEVTLSIDF DWRTGVQSKS WSSVAKKSQV EVMEFDVKRL IETVNSIHEE MFYLREREEE MQNLNRATNS KMAWLSFLSL FVCLGVAGMQ
201: FVHLKTFFEK KKVI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQY3]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.