Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- extracellular 1
- mitochondrion 4
- golgi 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00102 | Canola | cytosol | 64.89 | 86.39 |
| CDY19998 | Canola | endoplasmic reticulum, extracellular | 80.0 | 83.33 |
| Bra036221.1-P | Field mustard | endoplasmic reticulum, extracellular | 80.0 | 83.33 |
| CDX85243 | Canola | mitochondrion | 78.22 | 79.28 |
| CDY04053 | Canola | endoplasmic reticulum | 77.33 | 78.03 |
| CDY44411 | Canola | golgi, plasma membrane, plastid | 76.89 | 77.93 |
| Bra033081.1-P | Field mustard | golgi, plasma membrane, plastid | 76.89 | 77.93 |
| GSMUA_AchrUn_... | Banana | cytosol | 43.56 | 57.99 |
| GSMUA_Achr1P21760_001 | Banana | cytosol | 42.67 | 56.8 |
| VIT_14s0108g01140.t01 | Wine grape | extracellular | 51.11 | 54.76 |
| EER92205 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 50.67 | 53.27 |
| AT2G03290.1 | Thale cress | extracellular | 48.89 | 51.64 |
| KRH18453 | Soybean | golgi, plasma membrane, vacuole | 48.89 | 50.93 |
| KRG93569 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 48.44 | 50.46 |
| AT1G69460.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 47.56 | 50.0 |
| Os03t0376000-01 | Rice | endoplasmic reticulum, plasma membrane | 51.11 | 49.57 |
| AT1G26690.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 47.11 | 49.53 |
| Zm00001d022238_P001 | Maize | mitochondrion | 49.33 | 48.47 |
| TraesCS2B01G180800.1 | Wheat | mitochondrion | 48.89 | 48.25 |
| EER97600 | Sorghum | mitochondrion | 48.89 | 48.03 |
| Os07t0632700-01 | Rice | plasma membrane | 48.89 | 47.83 |
| TraesCS2A01G155600.1 | Wheat | golgi | 48.44 | 47.81 |
| TraesCS2D01G161400.1 | Wheat | endoplasmic reticulum, plastid | 48.44 | 47.81 |
| HORVU2Hr1G028220.5 | Barley | endoplasmic reticulum, extracellular | 48.89 | 47.41 |
| AT1G14010.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 44.44 | 47.17 |
| Zm00001d006951_P001 | Maize | mitochondrion | 48.0 | 47.16 |
| AT2G03040.1 | Thale cress | extracellular | 34.67 | 46.99 |
| KRH13540 | Soybean | cytosol | 16.0 | 46.15 |
| KRH01218 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 44.0 | 45.41 |
| AT1G09580.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 34.22 | 35.48 |
| Zm00001d047163_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 39.11 | 35.48 |
| AT1G57620.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 31.11 | 33.02 |
| AT1G21900.1 | Thale cress | plasma membrane | 31.56 | 32.87 |
| AT3G10780.1 | Thale cress | endoplasmic reticulum, plasma membrane | 27.11 | 28.11 |
Protein Annotations
| MapMan:22.3.5.2 | EntrezGene:822551 | ProteinID:AEE77531.1 | ArrayExpress:AT3G29070 | EnsemblPlantsGene:AT3G29070 | RefSeq:AT3G29070 |
| TAIR:AT3G29070 | RefSeq:AT3G29070-TAIR-G | EnsemblPlants:AT3G29070.1 | TAIR:AT3G29070.1 | Unigene:At.53557 | ProteinID:BAB02949.1 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 |
| GO:GO:0005794 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016192 | GO:GO:0032580 | GO:GO:0033116 | InterPro:GOLD_dom | InterPro:IPR009038 | RefSeq:NP_189550.2 |
| PFAM:PF01105 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PFscan:PS50866 | PANTHER:PTHR22811 | PANTHER:PTHR22811:SF47 | UniProt:Q9LJV9 | SMART:SM01190 | InterPro:TMP21-related |
| TMHMM:TMhelix | UniParc:UPI00000A609C | SEG:seg | : | : | : |
Description
Transmembrane emp24 domain-containing protein p24delta11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJV9]
Coordinates
chr3:+:11050081..11051153
Molecular Weight (calculated)
25971.9 Da
IEP (calculated)
9.368
GRAVY (calculated)
-0.324
Length
225 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLLPSRYKI HKTKLRWILT MMTMMMMMVM RRGESMRLDM ESGNTKCISD DIKTNYMTVG TYSIVNPNEG HHLPPSHKLF VTVSSPKGKS HHHAENVESG
101: KFVFTAEETG DYMTCFVAPG YRPTAKFAVD FEWKSGVEAK DWTTIAKRGQ ITMLEVEVRK LLDVTETIHE EMFQLIERER EMQELNRSTN SRMAALSLLS
201: FVVTMSVAGL QLRHLKSFLE RKKLL
101: KFVFTAEETG DYMTCFVAPG YRPTAKFAVD FEWKSGVEAK DWTTIAKRGQ ITMLEVEVRK LLDVTETIHE EMFQLIERER EMQELNRSTN SRMAALSLLS
201: FVVTMSVAGL QLRHLKSFLE RKKLL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.