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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • nucleus 1
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY19998 Canola endoplasmic reticulum, extracellular 100.0 100.0
Bra033081.1-P Field mustard golgi, plasma membrane, plastid 84.72 82.43
AT3G29070.1 Thale cress mitochondrion 83.33 80.0
GSMUA_AchrUn_... Banana cytosol 47.69 60.95
GSMUA_Achr1P21760_001 Banana cytosol 46.76 59.76
VIT_14s0108g01140.t01 Wine grape extracellular 54.63 56.19
EER92205 Sorghum endoplasmic reticulum, extracellular, plasma membrane 54.63 55.14
KRH18453 Soybean golgi, plasma membrane, vacuole 53.24 53.24
KRG93569 Soybean endoplasmic reticulum, extracellular, plasma membrane 52.31 52.31
Bra026866.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 50.93 51.89
Bra004382.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 51.39 51.63
Bra024694.1-P Field mustard endoplasmic reticulum, plasma membrane 50.93 51.4
Bra026559.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 50.93 50.93
TraesCS2B01G180800.1 Wheat mitochondrion 53.7 50.88
TraesCS2D01G161400.1 Wheat endoplasmic reticulum, plastid 53.24 50.44
TraesCS2A01G155600.1 Wheat golgi 53.24 50.44
Os07t0632700-01 Rice plasma membrane 53.7 50.43
Os03t0376000-01 Rice endoplasmic reticulum, plasma membrane 54.17 50.43
KRH13540 Soybean cytosol 18.06 50.0
HORVU2Hr1G028220.5 Barley endoplasmic reticulum, extracellular 53.24 49.57
Zm00001d022238_P001 Maize mitochondrion 52.31 49.34
EER97600 Sorghum mitochondrion 52.31 49.34
KRH01218 Soybean endoplasmic reticulum, plasma membrane, vacuole 49.54 49.08
Bra024781.1-P Field mustard endoplasmic reticulum, extracellular 48.15 48.6
Zm00001d006951_P001 Maize mitochondrion 50.93 48.03
Bra016283.1-P Field mustard endoplasmic reticulum 46.76 47.2
Bra016715.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 41.2 44.28
Zm00001d047163_P001 Maize endoplasmic reticulum, extracellular, vacuole 43.06 37.5
Bra030786.1-P Field mustard extracellular 36.11 36.97
Bra020010.1-P Field mustard endoplasmic reticulum, extracellular, golgi 34.72 35.38
Bra038147.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 34.26 34.42
Bra027911.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 33.33 33.33
Bra001380.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 31.48 31.34
Bra029868.1-P Field mustard plasma membrane 29.63 30.48
Bra034146.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 27.31 29.95
Bra016401.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 32.41 28.93
Bra017957.1-P Field mustard endoplasmic reticulum, golgi, vacuole 23.61 16.4
Protein Annotations
MapMan:22.3.5.2EnsemblPlantsGene:Bra036221EnsemblPlants:Bra036221.1EnsemblPlants:Bra036221.1-PGO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020GO:GO:0016021
InterPro:GOLD_domInterPro:IPR009038UniProt:M4F565PFAM:PF01105PFscan:PS50866PANTHER:PTHR22811
PANTHER:PTHR22811:SF47SMART:SM01190SignalP:SignalP-noTMInterPro:TMP21-relatedTMHMM:TMhelixUniParc:UPI0002541DDE
SEG:seg:::::
Description
AT3G29070 (E=3e-077) | protein transmembrane transporter
Coordinates
chrA09:+:2126202..2127652
Molecular Weight (calculated)
24793.3 Da
IEP (calculated)
7.198
GRAVY (calculated)
-0.085
Length
216 amino acids
Sequence
(BLAST)
001: MDLLKIQLTT LRWIIMMTLM LRIGESMRLD LESGITKCIS DDIKINYMTV GNYSVVNPNE ALHLPASHKI YVTVTSPKGH SQHHAENVES GKFVFTAMES
101: GDYTTCFVAL GFRPTAKFAV DFEWKSGVEA KDWATIAKRG QINMLEVEVR KLLDVTESIH DEMFELRERE REMQELNRST NSRMAALSLL SFVFTLSVAC
201: LQLWHLKSFL ERKKLL
Best Arabidopsis Sequence Match ( AT3G29070.1 )
(BLAST)
001: MDLLPSRYKI HKTKLRWILT MMTMMMMMVM RRGESMRLDM ESGNTKCISD DIKTNYMTVG TYSIVNPNEG HHLPPSHKLF VTVSSPKGKS HHHAENVESG
101: KFVFTAEETG DYMTCFVAPG YRPTAKFAVD FEWKSGVEAK DWTTIAKRGQ ITMLEVEVRK LLDVTETIHE EMFQLIERER EMQELNRSTN SRMAALSLLS
201: FVVTMSVAGL QLRHLKSFLE RKKLL
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJV9]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.