Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- endoplasmic reticulum 2
- mitochondrion 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G180800.1 | Wheat | mitochondrion | 98.25 | 98.25 |
| TraesCS2A01G155600.1 | Wheat | golgi | 96.05 | 96.05 |
| HORVU2Hr1G028220.5 | Barley | endoplasmic reticulum, extracellular | 91.67 | 90.09 |
| Zm00001d022238_P001 | Maize | mitochondrion | 82.89 | 82.53 |
| EER97600 | Sorghum | mitochondrion | 82.46 | 82.1 |
| Os07t0632700-01 | Rice | plasma membrane | 82.46 | 81.74 |
| Zm00001d006951_P001 | Maize | mitochondrion | 82.02 | 81.66 |
| GSMUA_Achr1P21760_001 | Banana | cytosol | 55.7 | 75.15 |
| GSMUA_AchrUn_... | Banana | cytosol | 55.26 | 74.56 |
| CDY37184 | Canola | endoplasmic reticulum, peroxisome, plastid | 14.91 | 68.0 |
| VIT_01s0182g00030.t01 | Wine grape | endoplasmic reticulum, extracellular, plasma membrane | 60.96 | 65.57 |
| VIT_14s0108g01140.t01 | Wine grape | extracellular | 58.77 | 63.81 |
| KRH50555 | Soybean | endoplasmic reticulum | 60.96 | 62.9 |
| KRH13540 | Soybean | cytosol | 21.05 | 61.54 |
| KRG89554 | Soybean | endoplasmic reticulum | 58.77 | 60.91 |
| Solyc04g005570.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 54.82 | 58.14 |
| CDY00102 | Canola | cytosol | 42.98 | 57.99 |
| PGSC0003DMT400007416 | Potato | endoplasmic reticulum, extracellular, vacuole | 54.39 | 57.94 |
| KRH18453 | Soybean | golgi, plasma membrane, vacuole | 54.82 | 57.87 |
| KRG93569 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 54.82 | 57.87 |
| Bra026866.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 53.07 | 57.08 |
| CDY33785 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 53.07 | 57.08 |
| AT1G26690.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 53.51 | 57.01 |
| PGSC0003DMT400073002 | Potato | extracellular | 53.07 | 56.81 |
| CDY16125 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 52.63 | 56.6 |
| AT1G14010.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 51.32 | 55.19 |
| CDX85047 | Canola | endoplasmic reticulum | 51.75 | 55.14 |
| Solyc05g013130.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 51.32 | 54.93 |
| KRH70789 | Soybean | cytosol, vacuole | 17.54 | 54.79 |
| CDY16181 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 51.32 | 54.67 |
| PGSC0003DMT400062438 | Potato | mitochondrion | 51.75 | 54.63 |
| CDX96872 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 50.88 | 54.46 |
| Bra024694.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 50.88 | 54.21 |
| Solyc01g010940.2.1 | Tomato | nucleus, plastid | 51.32 | 54.17 |
| CDY62212 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 50.44 | 53.99 |
| Bra004382.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 50.44 | 53.49 |
| CDY40925 | Canola | endoplasmic reticulum | 50.44 | 53.49 |
| CDY19998 | Canola | endoplasmic reticulum, extracellular | 50.44 | 53.24 |
| Bra036221.1-P | Field mustard | endoplasmic reticulum, extracellular | 50.44 | 53.24 |
| AT2G03290.1 | Thale cress | extracellular | 49.56 | 53.05 |
| CDX95934 | Canola | vacuole | 50.0 | 53.02 |
| AT1G69460.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 49.56 | 52.8 |
| CDY04053 | Canola | endoplasmic reticulum | 51.32 | 52.47 |
| KRH70788 | Soybean | extracellular | 32.89 | 52.45 |
| Bra024781.1-P | Field mustard | endoplasmic reticulum, extracellular | 49.12 | 52.34 |
| CDY45170 | Canola | endoplasmic reticulum, extracellular | 49.12 | 52.34 |
| Bra033081.1-P | Field mustard | golgi, plasma membrane, plastid | 50.88 | 52.25 |
| CDY44411 | Canola | golgi, plasma membrane, plastid | 50.88 | 52.25 |
| CDX85243 | Canola | mitochondrion | 50.88 | 52.25 |
| CDY03005 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 48.68 | 51.87 |
| CDY09334 | Canola | endoplasmic reticulum, extracellular, vacuole | 49.12 | 51.85 |
| Bra026559.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 49.12 | 51.85 |
| Bra016283.1-P | Field mustard | endoplasmic reticulum | 48.25 | 51.4 |
| CDY61620 | Canola | endoplasmic reticulum | 48.25 | 51.4 |
| CDY53680 | Canola | endoplasmic reticulum, extracellular, vacuole | 48.68 | 51.39 |
| CDY24142 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 47.37 | 50.47 |
| KRH01218 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 47.37 | 49.54 |
| AT3G29070.1 | Thale cress | mitochondrion | 47.81 | 48.44 |
| AT2G03040.1 | Thale cress | extracellular | 34.65 | 47.59 |
| TraesCS7D01G170400.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 39.91 | 46.91 |
| TraesCS6D01G309100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 39.91 | 43.13 |
| Bra016715.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 37.72 | 42.79 |
| TraesCS5D01G242600.1 | Wheat | endoplasmic reticulum | 34.65 | 37.62 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G161400.1 | EnsemblPlantsGene:TraesCS2D01G161400 | InterPro:GOLD_dom | InterPro:IPR009038 | InterPro:TMP21-related | ncoils:Coil |
| PANTHER:PTHR22811 | PANTHER:PTHR22811:SF112 | PFAM:PF01105 | PFscan:PS50866 | SEG:seg | SignalP:SignalP-noTM |
| SMART:SM01190 | TMHMM:TMhelix | MapMan:22.3.5.2 | : | : | : |
Description
No Description!
Coordinates
chr2D:-:106266306..106268881
Molecular Weight (calculated)
25584.8 Da
IEP (calculated)
8.096
GRAVY (calculated)
-0.258
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAARPGSPA PRRLPPSTLL LLAAVLLAAS PPARALRFDL ESGHTKCISD EIKVDSMAVG KYSVVAPDPS YPDAQLPESH RVSLRVTSPY GNSMHYSENV
101: QSGHFAFTAV EAGDYLACFW APDHKPPVTV TFEFDWKSGV TAKDWSNVAK KGKVDMMELE LKKLEDTIKS IHEEMFYLRE REEQMQNINR QTNSRMGWLS
201: FLSLGICLSV AGLQLWHLKT FFERKKLL
101: QSGHFAFTAV EAGDYLACFW APDHKPPVTV TFEFDWKSGV TAKDWSNVAK KGKVDMMELE LKKLEDTIKS IHEEMFYLRE REEQMQNINR QTNSRMGWLS
201: FLSLGICLSV AGLQLWHLKT FFERKKLL
001: MFLRSLNLCT ILLFLAISSQ VSQSLHFELQ SGRTKCISED IKSNSMTVGK YTVVNPNEAH PSPQSHKISI RVTSSYGNTY HHAEDVESGQ FAFTAVESGD
101: YMACYTAVDH KPEVTLSIDF DWRTGVQSKS WSSVAKKSQV EVMEFDVKRL IETVNSIHEE MFYLREREEE MQNLNRATNS KMAWLSFLSL FVCLGVAGMQ
201: FVHLKTFFEK KKVI
101: YMACYTAVDH KPEVTLSIDF DWRTGVQSKS WSSVAKKSQV EVMEFDVKRL IETVNSIHEE MFYLREREEE MQNLNRATNS KMAWLSFLSL FVCLGVAGMQ
201: FVHLKTFFEK KKVI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQY3]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.