Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 5
- golgi 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG93569 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 92.59 | 92.59 |
| KRH13540 | Soybean | cytosol | 31.02 | 85.9 |
| VIT_14s0108g01140.t01 | Wine grape | extracellular | 71.76 | 73.81 |
| GSMUA_Achr1P21760_001 | Banana | cytosol | 54.63 | 69.82 |
| GSMUA_AchrUn_... | Banana | cytosol | 53.7 | 68.64 |
| KRH50555 | Soybean | endoplasmic reticulum | 63.89 | 62.44 |
| KRG89554 | Soybean | endoplasmic reticulum | 61.11 | 60.0 |
| EER92205 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 58.8 | 59.35 |
| KRH01218 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 59.72 | 59.17 |
| CDY00102 | Canola | cytosol | 45.37 | 57.99 |
| Os07t0632700-01 | Rice | plasma membrane | 61.57 | 57.83 |
| TraesCS2B01G180800.1 | Wheat | mitochondrion | 58.8 | 55.7 |
| TraesCS2A01G155600.1 | Wheat | golgi | 58.33 | 55.26 |
| Os03t0376000-01 | Rice | endoplasmic reticulum, plasma membrane | 59.26 | 55.17 |
| Zm00001d022238_P001 | Maize | mitochondrion | 58.33 | 55.02 |
| TraesCS2D01G161400.1 | Wheat | endoplasmic reticulum, plastid | 57.87 | 54.82 |
| HORVU2Hr1G028220.5 | Barley | endoplasmic reticulum, extracellular | 58.8 | 54.74 |
| EER97600 | Sorghum | mitochondrion | 57.87 | 54.59 |
| Zm00001d006951_P001 | Maize | mitochondrion | 56.94 | 53.71 |
| CDY19998 | Canola | endoplasmic reticulum, extracellular | 53.24 | 53.24 |
| Bra036221.1-P | Field mustard | endoplasmic reticulum, extracellular | 53.24 | 53.24 |
| CDX85243 | Canola | mitochondrion | 53.24 | 51.8 |
| Bra033081.1-P | Field mustard | golgi, plasma membrane, plastid | 52.78 | 51.35 |
| CDY44411 | Canola | golgi, plasma membrane, plastid | 52.78 | 51.35 |
| CDY04053 | Canola | endoplasmic reticulum | 52.78 | 51.12 |
| KRH70789 | Soybean | cytosol, vacuole | 17.13 | 50.68 |
| KRH70788 | Soybean | extracellular | 33.33 | 50.35 |
| AT3G29070.1 | Thale cress | mitochondrion | 50.93 | 48.89 |
| Zm00001d047163_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 49.54 | 43.15 |
| KRH53215 | Soybean | endoplasmic reticulum | 39.81 | 40.57 |
| KRH48283 | Soybean | cytosol | 14.35 | 40.26 |
| KRH64707 | Soybean | plasma membrane | 39.81 | 40.0 |
| KRH59179 | Soybean | endoplasmic reticulum | 37.5 | 38.39 |
| KRH16308 | Soybean | endoplasmic reticulum | 37.5 | 37.67 |
| KRH10436 | Soybean | endoplasmic reticulum | 37.5 | 37.67 |
| KRH18772 | Soybean | plasma membrane | 37.04 | 37.21 |
| KRH43057 | Soybean | extracellular | 25.46 | 35.26 |
| KRH44035 | Soybean | endoplasmic reticulum, mitochondrion, plasma membrane | 38.43 | 33.74 |
Protein Annotations
| MapMan:22.3.5.2 | EMBL:ACUP02008076 | EnsemblPlantsGene:GLYMA_13G061200 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:GOLD_dom | UniProt:I1LWM1 | InterPro:IPR009038 | EnsemblPlants:KRH18453 | ProteinID:KRH18453 |
| ProteinID:KRH18453.1 | PFAM:PF01105 | PFscan:PS50866 | PANTHER:PTHR22811 | PANTHER:PTHR22811:SF72 | SMART:SM01190 |
| SignalP:SignalP-noTM | InterPro:TMP21-related | TMHMM:TMhelix | UniParc:UPI00023D09AC | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr13:-:15858458..15863619
Molecular Weight (calculated)
24445.2 Da
IEP (calculated)
6.394
GRAVY (calculated)
-0.147
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAMSDSVRS LALLSLAVMC SVANSMRFDL QSGQTKCISE DIKTNAMSVG KYSVVNPQEG YPLPDSHRII VKVTSPHAHT YHFGDHVDSG NYAFTASEAG
101: DYSACFWVQD TRDAPSVVTI EFEWRTGVAA KDWSKVAKKG QIEVMEFELK KLYDTVLSIH DEMFYLRERE EEMQDLNKAT NSKMFTFSFL SIVVCLSVAG
201: LQLWHLKTFF ERKKLL
101: DYSACFWVQD TRDAPSVVTI EFEWRTGVAA KDWSKVAKKG QIEVMEFELK KLYDTVLSIH DEMFYLRERE EEMQDLNKAT NSKMFTFSFL SIVVCLSVAG
201: LQLWHLKTFF ERKKLL
001: MFLRSLNLCT ILLFLAISSQ VSQSLHFELQ SGRTKCISED IKSNSMTVGK YTVVNPNEAH PSPQSHKISI RVTSSYGNTY HHAEDVESGQ FAFTAVESGD
101: YMACYTAVDH KPEVTLSIDF DWRTGVQSKS WSSVAKKSQV EVMEFDVKRL IETVNSIHEE MFYLREREEE MQNLNRATNS KMAWLSFLSL FVCLGVAGMQ
201: FVHLKTFFEK KKVI
101: YMACYTAVDH KPEVTLSIDF DWRTGVQSKS WSSVAKKSQV EVMEFDVKRL IETVNSIHEE MFYLREREEE MQNLNRATNS KMAWLSFLSL FVCLGVAGMQ
201: FVHLKTFFEK KKVI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQY3]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.