Factsheet for Os07t0632700-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
endoplasmic reticulum 2
plasma membrane 3
mitochondrion 2
extracellular 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G180800.1	Wheat	mitochondrion	83.04	83.77
Zm00001d022238_P001	Maize	mitochondrion	82.61	82.97
EER97600	Sorghum	mitochondrion	82.61	82.97
TraesCS2D01G161400.1	Wheat	endoplasmic reticulum, plastid	81.74	82.46
TraesCS2A01G155600.1	Wheat	golgi	81.74	82.46
Zm00001d006951_P001	Maize	mitochondrion	81.3	81.66
HORVU2Hr1G028220.5	Barley	endoplasmic reticulum, extracellular	78.7	78.02
GSMUA_Achr1P21760_001	Banana	cytosol	56.09	76.33
GSMUA_AchrUn_...	Banana	cytosol	54.35	73.96
Os03t0376000-01	Rice	endoplasmic reticulum, plasma membrane	70.87	70.26
CDY37184	Canola	endoplasmic reticulum, peroxisome, plastid	15.22	70.0
VIT_14s0108g01140.t01	Wine grape	extracellular	59.57	65.24
VIT_01s0182g00030.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	60.0	65.09
KRH13540	Soybean	cytosol	21.3	62.82
KRG93569	Soybean	endoplasmic reticulum, extracellular, plasma membrane	57.83	61.57
KRH18453	Soybean	golgi, plasma membrane, vacuole	57.83	61.57
KRH50555	Soybean	endoplasmic reticulum	59.13	61.54
AT1G26690.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	56.52	60.75
KRG89554	Soybean	endoplasmic reticulum	57.83	60.45
Solyc04g005570.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	56.09	60.0
PGSC0003DMT400007416	Potato	endoplasmic reticulum, extracellular, vacuole	55.65	59.81
CDY33785	Canola	endoplasmic reticulum, extracellular, plasma membrane	54.35	58.96
Bra026866.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	54.35	58.96
CDY16181	Canola	endoplasmic reticulum, plasma membrane, vacuole	54.78	58.88
CDX85047	Canola	endoplasmic reticulum	54.78	58.88
CDY16125	Canola	endoplasmic reticulum, extracellular, plasma membrane	53.91	58.49
Bra024694.1-P	Field mustard	endoplasmic reticulum, plasma membrane	54.35	58.41
PGSC0003DMT400073002	Potato	extracellular	53.91	58.22
CDY00102	Canola	cytosol	42.61	57.99
Solyc05g013130.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	53.48	57.75
CDX96872	Canola	endoplasmic reticulum, extracellular, plasma membrane	52.61	56.81
AT1G14010.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	52.17	56.6
PGSC0003DMT400062438	Potato	mitochondrion	53.04	56.48
CDY62212	Canola	endoplasmic reticulum, extracellular, plasma membrane	52.17	56.34
Solyc01g010940.2.1	Tomato	nucleus, plastid	52.17	55.56
CDX95934	Canola	vacuole	51.3	54.88
Bra004382.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	51.3	54.88
KRH70789	Soybean	cytosol, vacuole	17.39	54.79
CDY40925	Canola	endoplasmic reticulum	50.87	54.42
CDY61620	Canola	endoplasmic reticulum	50.43	54.21
Bra016283.1-P	Field mustard	endoplasmic reticulum	50.43	54.21
AT1G69460.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	50.43	54.21
Bra024781.1-P	Field mustard	endoplasmic reticulum, extracellular	50.0	53.74
CDY45170	Canola	endoplasmic reticulum, extracellular	50.0	53.74
Bra036221.1-P	Field mustard	endoplasmic reticulum, extracellular	50.43	53.7
CDY19998	Canola	endoplasmic reticulum, extracellular	50.43	53.7
AT2G03290.1	Thale cress	extracellular	49.57	53.52
CDY03005	Canola	endoplasmic reticulum, extracellular, plasma membrane	49.57	53.27
CDY24142	Canola	endoplasmic reticulum, plasma membrane, vacuole	49.57	53.27
CDY09334	Canola	endoplasmic reticulum, extracellular, vacuole	49.57	52.78
Bra026559.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	49.57	52.78
CDX85243	Canola	mitochondrion	50.87	52.7
CDY04053	Canola	endoplasmic reticulum	50.87	52.47
CDY53680	Canola	endoplasmic reticulum, extracellular, vacuole	49.13	52.31
CDY44411	Canola	golgi, plasma membrane, plastid	50.43	52.25
Bra033081.1-P	Field mustard	golgi, plasma membrane, plastid	50.43	52.25
KRH01218	Soybean	endoplasmic reticulum, plasma membrane, vacuole	48.7	51.38
KRH70788	Soybean	extracellular	31.3	50.35
AT3G29070.1	Thale cress	mitochondrion	47.83	48.89
AT2G03040.1	Thale cress	extracellular	34.35	47.59
Os06t0210100-01	Rice	plastid	41.3	45.45
Bra016715.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	39.57	45.27
Os02t0768200-01	Rice	endoplasmic reticulum, plasma membrane, vacuole	41.74	44.04
Os09t0453200-00	Rice	endoplasmic reticulum, plasma membrane	36.52	39.62
Os08t0469400-00	Rice	endoplasmic reticulum, extracellular, vacuole	20.43	34.31
Os03t0328300-01	Rice	extracellular	18.7	30.07

Protein Annotations

MapMan:22.3.5.2	EntrezGene:4344005	EMBL:AK060066	ProteinID:BAC79896.1	ProteinID:BAF22282.1	ProteinID:BAT02785.1
ncoils:Coil	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0005789	GO:GO:0016020	GO:GO:0016021	InterPro:GOLD_dom	InterPro:IPR009038	EnsemblPlantsGene:Os07g0632700
EnsemblPlants:Os07t0632700-01	PFAM:PF01105	PFscan:PS50866	PANTHER:PTHR22811	PANTHER:PTHR22811:SF112	UniProt:Q7XI54
SMART:SM01190	SignalP:SignalP-noTM	InterPro:TMP21-related	TMHMM:TMhelix	UniParc:UPI00001B3A87	RefSeq:XP_015647177.1
SEG:seg	:	:	:	:	:

Description

emp24/gp25L/p24 family protein. (Os07t0632700-01)

Coordinates

chr7:+:26242533..26245116

Molecular Weight (calculated)

25855.1 Da

IEP (calculated)

8.101

GRAVY (calculated)

-0.259

Length

230 amino acids

Sequence
(BLAST)

001: MAARRPGSPA PRWAPWPLLA AAAVLLLLSA APRTARALRF DLESGHTKCI SDEIKVNSMV VGKYHVVGPD PNFPDNPLPD SHRISLRVTS PYGNSVHYAE
101: NVPSGNFAFT ATEAGDYLAC FWAPDHKPPV SIGFEFDWRS GVAAKDWSNV AKKGQVDVME MELKKLEETI KSIHEEMFYL REREEEMQNL NKQTNSRMAW
201: LGFLSLGICL SVAGLQLWHL KTFFERKKLL

Best Arabidopsis Sequence Match ( AT1G26690.1 )
(BLAST)

001: MFLRSLNLCT ILLFLAISSQ VSQSLHFELQ SGRTKCISED IKSNSMTVGK YTVVNPNEAH PSPQSHKISI RVTSSYGNTY HHAEDVESGQ FAFTAVESGD
101: YMACYTAVDH KPEVTLSIDF DWRTGVQSKS WSSVAKKSQV EVMEFDVKRL IETVNSIHEE MFYLREREEE MQNLNRATNS KMAWLSFLSL FVCLGVAGMQ
201: FVHLKTFFEK KKVI

Arabidopsis Description

Transmembrane emp24 domain-containing protein p24delta9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQY3]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.