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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 6
  • golgi 5
  • plastid 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:nucleus, plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus, plasma membrane, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc04g005570.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 95.33 94.88
PGSC0003DMT400073002 Potato extracellular 75.7 76.06
PGSC0003DMT400062438 Potato mitochondrion 75.23 74.54
CDY37184 Canola endoplasmic reticulum, peroxisome, plastid 17.29 74.0
GSMUA_Achr1P21760_001 Banana cytosol 52.34 66.27
GSMUA_AchrUn_... Banana cytosol 52.34 66.27
KRH50555 Soybean endoplasmic reticulum 68.22 66.06
VIT_01s0182g00030.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 63.55 64.15
KRG89554 Soybean endoplasmic reticulum 65.42 63.64
CDY16125 Canola endoplasmic reticulum, extracellular, plasma membrane 59.81 60.38
CDY33785 Canola endoplasmic reticulum, extracellular, plasma membrane 59.81 60.38
Bra026866.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 59.81 60.38
AT1G26690.1 Thale cress endoplasmic reticulum, extracellular, vacuole 59.35 59.35
CDY16181 Canola endoplasmic reticulum, plasma membrane, vacuole 59.35 59.35
Bra024694.1-P Field mustard endoplasmic reticulum, plasma membrane 58.88 58.88
CDX85047 Canola endoplasmic reticulum 58.41 58.41
AT1G69460.1 Thale cress endoplasmic reticulum, extracellular, vacuole 58.41 58.41
CDY62212 Canola endoplasmic reticulum, extracellular, plasma membrane 57.94 58.22
CDX96872 Canola endoplasmic reticulum, extracellular, plasma membrane 57.94 58.22
AT1G14010.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 57.01 57.55
Bra004382.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 57.48 57.21
Bra026559.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 57.48 56.94
CDX95934 Canola vacuole 57.01 56.74
CDY09334 Canola endoplasmic reticulum, extracellular, vacuole 57.01 56.48
AT2G03290.1 Thale cress extracellular 56.07 56.34
CDY40925 Canola endoplasmic reticulum 56.54 56.28
CDY24142 Canola endoplasmic reticulum, plasma membrane, vacuole 56.07 56.07
CDY03005 Canola endoplasmic reticulum, extracellular, plasma membrane 56.07 56.07
CDY53680 Canola endoplasmic reticulum, extracellular, vacuole 56.54 56.02
Os07t0632700-01 Rice plasma membrane 59.81 55.65
Bra016283.1-P Field mustard endoplasmic reticulum 55.61 55.61
CDY61620 Canola endoplasmic reticulum 55.61 55.61
Zm00001d022238_P001 Maize mitochondrion 59.35 55.46
EER92205 Sorghum endoplasmic reticulum, extracellular, plasma membrane 55.14 55.14
TraesCS2A01G155600.1 Wheat golgi 58.41 54.82
TraesCS2B01G180800.1 Wheat mitochondrion 58.41 54.82
CDY45170 Canola endoplasmic reticulum, extracellular 54.67 54.67
Bra024781.1-P Field mustard endoplasmic reticulum, extracellular 54.67 54.67
EER97600 Sorghum mitochondrion 58.41 54.59
TraesCS2D01G161400.1 Wheat endoplasmic reticulum, plastid 57.94 54.39
Zm00001d006951_P001 Maize mitochondrion 57.94 54.15
HORVU2Hr1G028220.5 Barley endoplasmic reticulum, extracellular 58.41 53.88
KRH70788 Soybean extracellular 34.11 51.05
Os03t0376000-01 Rice endoplasmic reticulum, plasma membrane 55.14 50.86
KRH70789 Soybean cytosol, vacuole 16.82 49.32
AT2G03040.1 Thale cress extracellular 37.85 48.8
Bra016715.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 42.52 45.27
PGSC0003DMT400002378 Potato endoplasmic reticulum, extracellular, plasma membrane 38.32 39.05
Zm00001d047163_P001 Maize endoplasmic reticulum, extracellular, vacuole 44.39 38.31
PGSC0003DMT400061146 Potato extracellular 36.45 37.14
PGSC0003DMT400045273 Potato endoplasmic reticulum, extracellular, plasma membrane 35.05 35.71
PGSC0003DMT400045277 Potato extracellular 35.51 35.51
PGSC0003DMT400045270 Potato endoplasmic reticulum, extracellular, plasma membrane 32.71 32.56
Protein Annotations
EntrezGene:102590491MapMan:22.3.5.2GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005783GO:GO:0005789GO:GO:0016020GO:GO:0016021InterPro:GOLD_domInterPro:IPR009038
UniProt:M0ZSY3PFAM:PF01105EnsemblPlantsGene:PGSC0003DMG400002852PGSC:PGSC0003DMG400002852EnsemblPlants:PGSC0003DMT400007416PFscan:PS50866
PANTHER:PTHR22811PANTHER:PTHR22811:SF47SMART:SM01190SignalP:SignalP-noTMInterPro:TMP21-relatedTMHMM:TMhelix
UniParc:UPI000295C45CRefSeq:XP_006344261.1SEG:seg:::
Description
Transmembrane emp24 domain-containing protein 10 [Source:PGSC_GENE;Acc:PGSC0003DMG400002852]
Coordinates
chr4:-:216114..219998
Molecular Weight (calculated)
24801.1 Da
IEP (calculated)
7.725
GRAVY (calculated)
-0.261
Length
214 amino acids
Sequence
(BLAST)
001: MKILTSKSLF MFLILMFFSM KIHSLQFEVL SGRTKCIAED IKSHSMTVGK YHIVNPNEPH PLPDTHKVTI RVTSTHGNTF HYADNVHEGH FAFETTEAGD
101: YMTCFYAADH KPPVTMTINF DWKSGVAAKD WTNVAKKGSV DLMELELKKM YEHVKNIHDE MFYLREREEE MQELNRSTNS KMAWMTGLSI CVCLSVAGLQ
201: LWHLKTFFEK KKLI
Best Arabidopsis Sequence Match ( AT1G26690.1 )
(BLAST)
001: MFLRSLNLCT ILLFLAISSQ VSQSLHFELQ SGRTKCISED IKSNSMTVGK YTVVNPNEAH PSPQSHKISI RVTSSYGNTY HHAEDVESGQ FAFTAVESGD
101: YMACYTAVDH KPEVTLSIDF DWRTGVQSKS WSSVAKKSQV EVMEFDVKRL IETVNSIHEE MFYLREREEE MQNLNRATNS KMAWLSFLSL FVCLGVAGMQ
201: FVHLKTFFEK KKVI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQY3]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.