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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 2
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:nucleus, plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY61620 Canola endoplasmic reticulum 100.0 100.0
Bra024694.1-P Field mustard endoplasmic reticulum, plasma membrane 80.37 80.37
AT1G26690.1 Thale cress endoplasmic reticulum, extracellular, vacuole 78.5 78.5
Bra004382.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 67.76 67.44
Bra026866.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 62.15 62.74
GSMUA_Achr1P21760_001 Banana cytosol 46.26 58.58
VIT_01s0182g00030.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 57.48 58.02
Bra026559.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 57.94 57.41
GSMUA_AchrUn_... Banana cytosol 45.33 57.4
KRH50555 Soybean endoplasmic reticulum 58.88 57.01
Solyc05g013130.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 56.07 56.34
PGSC0003DMT400073002 Potato extracellular 56.07 56.34
KRG89554 Soybean endoplasmic reticulum 57.48 55.91
PGSC0003DMT400007416 Potato endoplasmic reticulum, extracellular, vacuole 55.61 55.61
Bra024781.1-P Field mustard endoplasmic reticulum, extracellular 55.61 55.61
Solyc04g005570.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 54.67 54.42
EER92205 Sorghum endoplasmic reticulum, extracellular, plasma membrane 52.8 52.8
PGSC0003DMT400062438 Potato mitochondrion 53.27 52.78
Zm00001d022238_P001 Maize mitochondrion 56.07 52.4
EER97600 Sorghum mitochondrion 55.61 51.97
Solyc01g010940.2.1 Tomato nucleus, plastid 52.34 51.85
Zm00001d006951_P001 Maize mitochondrion 54.67 51.09
Bra016715.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 47.66 50.75
Os07t0632700-01 Rice plasma membrane 54.21 50.43
TraesCS2B01G180800.1 Wheat mitochondrion 52.34 49.12
TraesCS2D01G161400.1 Wheat endoplasmic reticulum, plastid 51.4 48.25
TraesCS2A01G155600.1 Wheat golgi 51.4 48.25
KRH70789 Soybean cytosol, vacuole 16.36 47.95
Os03t0376000-01 Rice endoplasmic reticulum, plasma membrane 51.87 47.84
Bra033081.1-P Field mustard golgi, plasma membrane, plastid 49.07 47.3
KRH70788 Soybean extracellular 31.31 46.85
Bra036221.1-P Field mustard endoplasmic reticulum, extracellular 47.2 46.76
HORVU2Hr1G028220.5 Barley endoplasmic reticulum, extracellular 50.47 46.55
Bra030786.1-P Field mustard extracellular 35.05 35.55
Zm00001d047163_P001 Maize endoplasmic reticulum, extracellular, vacuole 40.65 35.08
Bra001380.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 34.11 33.64
Bra038147.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 33.64 33.49
Bra027911.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 33.64 33.33
Bra020010.1-P Field mustard endoplasmic reticulum, extracellular, golgi 32.71 33.02
Bra034146.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 28.97 31.47
Bra016401.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 34.58 30.58
Bra029868.1-P Field mustard plasma membrane 29.91 30.48
Bra017957.1-P Field mustard endoplasmic reticulum, golgi, vacuole 21.96 15.11
Protein Annotations
MapMan:22.3.5.2EnsemblPlantsGene:Bra016283EnsemblPlants:Bra016283.1EnsemblPlants:Bra016283.1-PGO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020GO:GO:0016021
InterPro:GOLD_domInterPro:IPR009038UniProt:M4DIF6PFAM:PF01105PFscan:PS50866PANTHER:PTHR22811
PANTHER:PTHR22811:SF47SMART:SM01190SignalP:SignalP-noTMInterPro:TMP21-relatedTMHMM:TMhelixUniParc:UPI0002546026
Description
AT1G26690 (E=6e-095) | emp24/gp25L/p24 family protein
Coordinates
chrA08:-:17682515..17683690
Molecular Weight (calculated)
24099.0 Da
IEP (calculated)
6.738
GRAVY (calculated)
-0.206
Length
214 amino acids
Sequence
(BLAST)
001: MVLRPEYLCT FLLTIAILSH VSQPLHFELK SGKSKCISED IKSNAMTVGK YTVVNPNEPH PTPQSHKINI RVTSSQGNTY HHAEEVDSGQ FSFTAVEGGE
101: YSACFAAHDH KPDVTLSIDL EWGSGVHYKS LGSLAKKSKV EVMEFEVKAL IETVNSIHDE MFYLRDREEE MQDLNRATNS KMAWLGLLSL FVCLGVAGMQ
201: FMHLKTFFEK KKVI
Best Arabidopsis Sequence Match ( AT1G26690.1 )
(BLAST)
001: MFLRSLNLCT ILLFLAISSQ VSQSLHFELQ SGRTKCISED IKSNSMTVGK YTVVNPNEAH PSPQSHKISI RVTSSYGNTY HHAEDVESGQ FAFTAVESGD
101: YMACYTAVDH KPEVTLSIDF DWRTGVQSKS WSSVAKKSQV EVMEFDVKRL IETVNSIHEE MFYLREREEE MQNLNRATNS KMAWLSFLSL FVCLGVAGMQ
201: FVHLKTFFEK KKVI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQY3]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.