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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:
  • plastid 3
  • mitochondrion 1
  • endoplasmic reticulum 4
  • nucleus 1
  • extracellular 3
  • vacuole 3
  • plasma membrane 4
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY16181 Canola endoplasmic reticulum, plasma membrane, vacuole 99.53 99.53
CDX85047 Canola endoplasmic reticulum 98.13 98.13
AT1G26690.1 Thale cress endoplasmic reticulum, extracellular, vacuole 86.92 86.92
Bra016283.1-P Field mustard endoplasmic reticulum 80.37 80.37
Bra004382.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 74.3 73.95
Bra026866.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 62.62 63.21
VIT_01s0182g00030.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 61.68 62.26
KRH50555 Soybean endoplasmic reticulum 63.55 61.54
GSMUA_Achr1P21760_001 Banana cytosol 48.13 60.95
Solyc05g013130.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 60.28 60.56
KRG89554 Soybean endoplasmic reticulum 62.15 60.45
PGSC0003DMT400073002 Potato extracellular 59.81 60.09
Bra026559.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 60.28 59.72
GSMUA_AchrUn_... Banana cytosol 46.73 59.17
Solyc04g005570.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 59.35 59.07
PGSC0003DMT400007416 Potato endoplasmic reticulum, extracellular, vacuole 58.88 58.88
Bra024781.1-P Field mustard endoplasmic reticulum, extracellular 56.54 56.54
EER92205 Sorghum endoplasmic reticulum, extracellular, plasma membrane 54.67 54.67
Os07t0632700-01 Rice plasma membrane 58.41 54.35
Bra016715.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 50.47 53.73
PGSC0003DMT400062438 Potato mitochondrion 54.21 53.7
Solyc01g010940.2.1 Tomato nucleus, plastid 53.74 53.24
Zm00001d022238_P001 Maize mitochondrion 56.07 52.4
EER97600 Sorghum mitochondrion 55.61 51.97
TraesCS2B01G180800.1 Wheat mitochondrion 55.14 51.75
Bra033081.1-P Field mustard golgi, plasma membrane, plastid 53.27 51.35
TraesCS2A01G155600.1 Wheat golgi 54.67 51.32
Zm00001d006951_P001 Maize mitochondrion 54.67 51.09
Bra036221.1-P Field mustard endoplasmic reticulum, extracellular 51.4 50.93
TraesCS2D01G161400.1 Wheat endoplasmic reticulum, plastid 54.21 50.88
Os03t0376000-01 Rice endoplasmic reticulum, plasma membrane 55.14 50.86
KRH70788 Soybean extracellular 33.18 49.65
HORVU2Hr1G028220.5 Barley endoplasmic reticulum, extracellular 53.74 49.57
KRH70789 Soybean cytosol, vacuole 15.89 46.58
Bra030786.1-P Field mustard extracellular 37.85 38.39
Zm00001d047163_P001 Maize endoplasmic reticulum, extracellular, vacuole 44.39 38.31
Bra020010.1-P Field mustard endoplasmic reticulum, extracellular, golgi 36.92 37.26
Bra038147.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 37.38 37.21
Bra027911.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 37.38 37.04
Bra001380.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 34.11 33.64
Bra016401.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 37.85 33.47
Bra029868.1-P Field mustard plasma membrane 30.84 31.43
Bra034146.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 28.5 30.96
Bra017957.1-P Field mustard endoplasmic reticulum, golgi, vacuole 24.77 17.04
Protein Annotations
MapMan:22.3.5.2EnsemblPlantsGene:Bra024694EnsemblPlants:Bra024694.1EnsemblPlants:Bra024694.1-PGO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020GO:GO:0016021
InterPro:GOLD_domInterPro:IPR009038UniProt:M4E7D9PFAM:PF01105PFscan:PS50866PANTHER:PTHR22811
PANTHER:PTHR22811:SF47SMART:SM01190SignalP:SignalP-noTMInterPro:TMP21-relatedTMHMM:TMhelixUniParc:UPI0002542810
Description
AT1G26690 (E=3e-105) | emp24/gp25L/p24 family protein
Coordinates
chrA09:-:23464298..23465195
Molecular Weight (calculated)
24270.1 Da
IEP (calculated)
7.303
GRAVY (calculated)
-0.212
Length
214 amino acids
Sequence
(BLAST)
001: MVLRSENLWT FLITLAIISR VSQSLHFELR SGRTKCISED IKSNSMTVGK YTVVNPNEAH PSPPSHKISI RVTSSYGNTF HHAEDVDSGQ FAFTAVEAGD
101: YMACFTANGH KPEVTLSIDF DWRTGIHSKS WGSVAKKSQV EVMEFEVKQL IETVNSIHDE MFYLRDREEE MQNLNRGTNS KMAWLSLLSL FVCLGVAGMQ
201: FMHLKSFLEK KKVI
Best Arabidopsis Sequence Match ( AT1G26690.1 )
(BLAST)
001: MFLRSLNLCT ILLFLAISSQ VSQSLHFELQ SGRTKCISED IKSNSMTVGK YTVVNPNEAH PSPQSHKISI RVTSSYGNTY HHAEDVESGQ FAFTAVESGD
101: YMACYTAVDH KPEVTLSIDF DWRTGVQSKS WSSVAKKSQV EVMEFDVKRL IETVNSIHEE MFYLREREEE MQNLNRATNS KMAWLSFLSL FVCLGVAGMQ
201: FVHLKTFFEK KKVI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQY3]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.