Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400007416 | Potato | endoplasmic reticulum, extracellular, vacuole | 94.88 | 95.33 |
| Solyc01g010940.2.1 | Tomato | nucleus, plastid | 75.35 | 75.0 |
| Solyc05g013130.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 73.49 | 74.18 |
| CDY37184 | Canola | endoplasmic reticulum, peroxisome, plastid | 17.21 | 74.0 |
| GSMUA_Achr1P21760_001 | Banana | cytosol | 53.49 | 68.05 |
| GSMUA_AchrUn_... | Banana | cytosol | 53.49 | 68.05 |
| KRH50555 | Soybean | endoplasmic reticulum | 66.51 | 64.71 |
| VIT_01s0182g00030.t01 | Wine grape | endoplasmic reticulum, extracellular, plasma membrane | 63.72 | 64.62 |
| KRG89554 | Soybean | endoplasmic reticulum | 63.72 | 62.27 |
| CDY16125 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 59.07 | 59.91 |
| CDY16181 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 59.53 | 59.81 |
| CDY33785 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 58.6 | 59.43 |
| Bra026866.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 58.6 | 59.43 |
| Bra024694.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 59.07 | 59.35 |
| AT1G26690.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 58.6 | 58.88 |
| CDX85047 | Canola | endoplasmic reticulum | 58.6 | 58.88 |
| AT1G69460.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 58.14 | 58.41 |
| CDX95934 | Canola | vacuole | 58.14 | 58.14 |
| Bra004382.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 57.67 | 57.67 |
| CDY62212 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 56.74 | 57.28 |
| CDY40925 | Canola | endoplasmic reticulum | 57.21 | 57.21 |
| AT1G14010.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 56.28 | 57.08 |
| CDX96872 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 56.28 | 56.81 |
| Os07t0632700-01 | Rice | plasma membrane | 60.0 | 56.09 |
| EER92205 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 55.81 | 56.07 |
| AT2G03290.1 | Thale cress | extracellular | 55.35 | 55.87 |
| CDY03005 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 55.35 | 55.61 |
| Bra026559.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 55.81 | 55.56 |
| TraesCS2B01G180800.1 | Wheat | mitochondrion | 58.6 | 55.26 |
| CDY24142 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 54.88 | 55.14 |
| CDY09334 | Canola | endoplasmic reticulum, extracellular, vacuole | 55.35 | 55.09 |
| Zm00001d022238_P001 | Maize | mitochondrion | 58.6 | 55.02 |
| TraesCS2D01G161400.1 | Wheat | endoplasmic reticulum, plastid | 58.14 | 54.82 |
| TraesCS2A01G155600.1 | Wheat | golgi | 58.14 | 54.82 |
| CDY61620 | Canola | endoplasmic reticulum | 54.42 | 54.67 |
| Bra016283.1-P | Field mustard | endoplasmic reticulum | 54.42 | 54.67 |
| EER97600 | Sorghum | mitochondrion | 58.14 | 54.59 |
| CDY45170 | Canola | endoplasmic reticulum, extracellular | 53.95 | 54.21 |
| Bra024781.1-P | Field mustard | endoplasmic reticulum, extracellular | 53.95 | 54.21 |
| CDY53680 | Canola | endoplasmic reticulum, extracellular, vacuole | 54.42 | 54.17 |
| Zm00001d006951_P001 | Maize | mitochondrion | 57.21 | 53.71 |
| HORVU2Hr1G028220.5 | Barley | endoplasmic reticulum, extracellular | 57.67 | 53.45 |
| Os03t0376000-01 | Rice | endoplasmic reticulum, plasma membrane | 55.81 | 51.72 |
| KRH70788 | Soybean | extracellular | 33.95 | 51.05 |
| KRH70789 | Soybean | cytosol, vacuole | 17.21 | 50.68 |
| AT2G03040.1 | Thale cress | extracellular | 37.67 | 48.8 |
| Bra016715.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 40.93 | 43.78 |
| Solyc11g013000.1.1 | Tomato | plastid | 39.53 | 40.48 |
| Zm00001d047163_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 43.72 | 37.9 |
| Solyc01g104220.2.1 | Tomato | endoplasmic reticulum | 37.21 | 37.74 |
| Solyc06g060450.2.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 37.21 | 37.21 |
| Solyc10g045640.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 36.74 | 36.92 |
| Solyc06g060440.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 36.28 | 36.62 |
| Solyc06g060430.1.1 | Tomato | cytosol | 13.49 | 31.52 |
Protein Annotations
| EnsemblPlants:Solyc04g005570.2.1 | EnsemblPlantsGene:Solyc04g005570.2 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0005789 | GO:GO:0016020 | GO:GO:0016021 | InterPro:GOLD_dom | InterPro:IPR009038 |
| InterPro:TMP21-related | PANTHER:PTHR22811 | PANTHER:PTHR22811:SF47 | PFAM:PF01105 | PFscan:PS50866 | SignalP:SignalP-noTM |
| SMART:SM01190 | TMHMM:TMhelix | UniParc:UPI00027663EA | UniProt:K4BNG3 | MapMan:22.3.5.2 | : |
Description
No Description!
Coordinates
chr4:-:379991..382905
Molecular Weight (calculated)
24902.3 Da
IEP (calculated)
7.726
GRAVY (calculated)
-0.224
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MKIFIRSKSL FMFVILMFIS MKIHSLQFEV LSGRTKCIAE DIKSHSMTVG KYHIVNPNES HPLPDTHKVT LRVTSTHGNT FHYADNVHEG HFAFETTEAG
101: DYMACFYAAD HKPPVTMTIN FDWKSGVAAK DWTNVAKKGS IDLMELELKK MYEHVQSIHD EMFYLREREE EMQELNRSTN SKMAWMTGLS ICVCLSVAGL
201: QLWHLKTFFE KKKLI
101: DYMACFYAAD HKPPVTMTIN FDWKSGVAAK DWTNVAKKGS IDLMELELKK MYEHVQSIHD EMFYLREREE EMQELNRSTN SKMAWMTGLS ICVCLSVAGL
201: QLWHLKTFFE KKKLI
001: MFLRSLNLCT ILLFLAISSQ VSQSLHFELQ SGRTKCISED IKSNSMTVGK YTVVNPNEAH PSPQSHKISI RVTSSYGNTY HHAEDVESGQ FAFTAVESGD
101: YMACYTAVDH KPEVTLSIDF DWRTGVQSKS WSSVAKKSQV EVMEFDVKRL IETVNSIHEE MFYLREREEE MQNLNRATNS KMAWLSFLSL FVCLGVAGMQ
201: FVHLKTFFEK KKVI
101: YMACYTAVDH KPEVTLSIDF DWRTGVQSKS WSSVAKKSQV EVMEFDVKRL IETVNSIHEE MFYLREREEE MQNLNRATNS KMAWLSFLSL FVCLGVAGMQ
201: FVHLKTFFEK KKVI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQY3]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.