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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY09334 Canola endoplasmic reticulum, extracellular, vacuole 94.91 94.91
Bra026559.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 94.91 94.91
CDY37184 Canola endoplasmic reticulum, peroxisome, plastid 20.37 88.0
CDY03005 Canola endoplasmic reticulum, extracellular, plasma membrane 71.3 71.96
CDY33785 Canola endoplasmic reticulum, extracellular, plasma membrane 70.37 71.7
CDY45170 Canola endoplasmic reticulum, extracellular 70.37 71.03
CDY62212 Canola endoplasmic reticulum, extracellular, plasma membrane 69.91 70.89
CDX96872 Canola endoplasmic reticulum, extracellular, plasma membrane 69.91 70.89
CDY16125 Canola endoplasmic reticulum, extracellular, plasma membrane 69.44 70.75
AT2G03290.1 Thale cress extracellular 68.06 69.01
AT2G03040.1 Thale cress extracellular 49.07 63.86
GSMUA_Achr1P21760_001 Banana cytosol 45.37 57.99
CDX85047 Canola endoplasmic reticulum 56.94 57.48
CDY16181 Canola endoplasmic reticulum, plasma membrane, vacuole 56.48 57.01
GSMUA_AchrUn_... Banana cytosol 44.44 56.8
CDY00102 Canola cytosol 44.44 56.8
PGSC0003DMT400007416 Potato endoplasmic reticulum, extracellular, vacuole 56.02 56.54
KRH50555 Soybean endoplasmic reticulum 56.94 55.66
CDY24142 Canola endoplasmic reticulum, plasma membrane, vacuole 55.09 55.61
CDY61620 Canola endoplasmic reticulum 54.63 55.14
CDY40925 Canola endoplasmic reticulum 54.63 54.88
Solyc04g005570.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 54.17 54.42
CDX95934 Canola vacuole 54.17 54.42
VIT_01s0182g00030.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 53.24 54.25
KRG89554 Soybean endoplasmic reticulum 54.63 53.64
EER92205 Sorghum endoplasmic reticulum, extracellular, plasma membrane 51.39 51.87
PGSC0003DMT400062438 Potato mitochondrion 51.85 51.85
PGSC0003DMT400073002 Potato extracellular 50.93 51.64
Solyc05g013130.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 50.93 51.64
CDY19998 Canola endoplasmic reticulum, extracellular 51.39 51.39
Solyc01g010940.2.1 Tomato nucleus, plastid 50.93 50.93
CDX85243 Canola mitochondrion 52.31 50.9
CDY44411 Canola golgi, plasma membrane, plastid 51.39 50.0
CDY04053 Canola endoplasmic reticulum 50.93 49.33
Os07t0632700-01 Rice plasma membrane 52.31 49.13
TraesCS2B01G180800.1 Wheat mitochondrion 51.85 49.12
TraesCS2A01G155600.1 Wheat golgi 51.85 49.12
TraesCS2D01G161400.1 Wheat endoplasmic reticulum, plastid 51.39 48.68
HORVU2Hr1G028220.5 Barley endoplasmic reticulum, extracellular 51.39 47.84
Zm00001d022238_P001 Maize mitochondrion 50.46 47.6
EER97600 Sorghum mitochondrion 50.46 47.6
Zm00001d006951_P001 Maize mitochondrion 49.54 46.72
Os03t0376000-01 Rice endoplasmic reticulum, plasma membrane 50.0 46.55
KRH70789 Soybean cytosol, vacuole 15.28 45.21
KRH70788 Soybean extracellular 29.63 44.76
CDY04681 Canola endoplasmic reticulum 34.72 35.71
Zm00001d047163_P001 Maize endoplasmic reticulum, extracellular, vacuole 40.28 35.08
CDX73903 Canola endoplasmic reticulum, extracellular, plasma membrane 33.33 34.62
CDX73906 Canola endoplasmic reticulum, extracellular, plasma membrane 33.33 34.62
CDY00701 Canola plasma membrane 33.33 34.62
CDY08168 Canola endoplasmic reticulum 25.46 33.33
CDY31078 Canola endoplasmic reticulum 34.26 33.04
CDY20688 Canola endoplasmic reticulum, golgi, nucleus 34.26 33.04
CDY50894 Canola endoplasmic reticulum, golgi, plasma membrane 32.87 31.7
CDX96570 Canola endoplasmic reticulum, extracellular, plasma membrane 33.8 31.33
CDX93498 Canola endoplasmic reticulum, golgi, plasma membrane 32.41 31.25
CDY08577 Canola plasma membrane 30.09 30.95
CDY00971 Canola plasma membrane 30.09 30.95
CDY23801 Canola endoplasmic reticulum, extracellular, plasma membrane 30.56 30.7
CDY31789 Canola plasma membrane 30.56 30.7
CDY38827 Canola endoplasmic reticulum, extracellular, vacuole 33.8 30.67
CDX95293 Canola endoplasmic reticulum, extracellular, golgi 30.56 30.56
CDY39938 Canola endoplasmic reticulum, extracellular, plasma membrane 30.56 30.56
CDY36275 Canola endoplasmic reticulum, extracellular, plasma membrane 27.31 29.95
Protein Annotations
MapMan:22.3.5.2GO:A0A078IRJ9UniProt:A0A078IRJ9EnsemblPlants:CDY53680ProteinID:CDY53680ProteinID:CDY53680.1
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789
GO:GO:0016020GO:GO:0016021InterPro:GOLD_domEnsemblPlantsGene:GSBRNA2T00011229001InterPro:IPR009038PFAM:PF01105
PFscan:PS50866PANTHER:PTHR22811PANTHER:PTHR22811:SF47SMART:SM01190SignalP:SignalP-noTMInterPro:TMP21-related
TMHMM:TMhelixUniParc:UPI0004EE1833SEG:seg:::
Description
BnaC02g48010DBnaC02g48010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IRJ9]
Coordinates
chrLK033227:-:7255..8429
Molecular Weight (calculated)
24755.8 Da
IEP (calculated)
7.667
GRAVY (calculated)
-0.173
Length
216 amino acids
Sequence
(BLAST)
001: MDLLRRSLVC LLIVALFSPT ALSMQFELRS GQMKCISEDI HEKSISVGKY FIVNPNEDHP LPDSHKITAK MVSPKWNALH EAVKVEAGEF SFTAFETGDY
101: FTCISAVDHK PQTTLTIDFV WTSGVHSAAS KDWSKVPKRS QVKMMELSVK RLFDTAESIH DEMYYLRDRE AEMQELNRST NSKMAWFSFL SLGFSLSVAG
201: LQFWHLKSFF EKKKLI
Best Arabidopsis Sequence Match ( AT1G14010.1 )
(BLAST)
001: MNHRRSSIVL LILSILSPVT LSIRYELLSG HTKCISEEIH ANAMTIGKYS IINPHEDHPL PSSHKVTVRV TSPQGTAYHE SDGVESGQFS FVAVETGDYI
101: SCFSAVDHKP ETTLIIDFDW RTGIHTKDWS NVAKKSQVET MEFEVKKLFE TVNGIHDEMF YLRDREEEMH NLNIATNSKM AWLSFVSLAV CLSVAGLQFW
201: HLKTFFQKKK LI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta7 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYG1]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.