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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • nucleus 1
  • endoplasmic reticulum 3
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:endoplasmic reticulum, nucleus
BaCelLo:nucleus
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra030786.1-P Field mustard extracellular 93.75 99.53
CDY20688 Canola endoplasmic reticulum, golgi, nucleus 95.98 95.98
CDX93498 Canola endoplasmic reticulum, golgi, plasma membrane 80.36 80.36
CDY50894 Canola endoplasmic reticulum, golgi, plasma membrane 79.46 79.46
AT1G09580.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 76.34 78.8
CDY31789 Canola plasma membrane 68.3 71.16
KRH48283 Soybean cytosol 24.11 70.13
CDY23801 Canola endoplasmic reticulum, extracellular, plasma membrane 66.52 69.3
CDY39938 Canola endoplasmic reticulum, extracellular, plasma membrane 66.52 68.98
CDX95293 Canola endoplasmic reticulum, extracellular, golgi 66.52 68.98
KRH59179 Soybean endoplasmic reticulum 62.5 66.35
VIT_12s0034g01440.t01 Wine grape endoplasmic reticulum, extracellular 61.61 63.89
TraesCS7A01G169500.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 54.91 63.4
TraesCS7D01G170400.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 54.91 63.4
Solyc10g045640.1.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 59.82 62.62
EES07590 Sorghum endoplasmic reticulum, extracellular, vacuole 57.59 62.32
Solyc01g104220.2.1 Tomato endoplasmic reticulum 57.59 60.85
Os06t0210100-01 Rice plastid 56.7 60.77
TraesCS6B01G361000.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 56.7 60.19
PGSC0003DMT400061146 Potato extracellular 56.25 60.0
TraesCS6A01G330200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 56.25 59.72
Zm00001d037163_P002 Maize extracellular, plasma membrane 56.25 59.72
Zm00001d018194_P001 Maize extracellular 44.64 59.52
TraesCS6D01G309100.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 55.8 59.24
KRH43057 Soybean extracellular 41.07 58.97
GSMUA_Achr6P02320_001 Banana endoplasmic reticulum, plasma membrane 56.7 58.8
CDY04681 Canola endoplasmic reticulum 54.91 58.57
Os02t0768200-01 Rice endoplasmic reticulum, plasma membrane, vacuole 56.7 58.26
KRH10436 Soybean endoplasmic reticulum 55.8 58.14
EER88046 Sorghum endoplasmic reticulum 55.36 57.94
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, plasma membrane 55.8 57.87
TraesCS7B01G074300.1 Wheat plasma membrane 54.91 56.94
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, vacuole 54.46 55.71
Zm00001d005857_P001 Maize cytosol, golgi 38.84 54.04
EER96837 Sorghum extracellular 50.0 53.85
GSMUA_Achr3P20310_001 Banana plasma membrane 51.34 53.24
Os09t0453200-00 Rice endoplasmic reticulum, plasma membrane 50.0 52.83
TraesCS5B01G233900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 48.66 52.15
CDY37184 Canola endoplasmic reticulum, peroxisome, plastid 11.61 52.0
CDX96570 Canola endoplasmic reticulum, extracellular, plasma membrane 53.57 51.5
KRH44035 Soybean endoplasmic reticulum, mitochondrion, plasma membrane 56.25 51.22
TraesCS5A01G235500.1 Wheat extracellular, vacuole 47.77 50.95
TraesCS5D01G242600.1 Wheat endoplasmic reticulum 47.77 50.95
CDY38827 Canola endoplasmic reticulum, extracellular, vacuole 53.12 50.0
CDY08168 Canola endoplasmic reticulum 36.61 49.7
Os08t0469400-00 Rice endoplasmic reticulum, extracellular, vacuole 29.46 48.18
HORVU5Hr1G067730.1 Barley cytosol, peroxisome 47.32 47.11
CDX73906 Canola endoplasmic reticulum, extracellular, plasma membrane 42.86 46.15
CDX73903 Canola endoplasmic reticulum, extracellular, plasma membrane 42.86 46.15
HORVU7Hr1G035390.1 Barley mitochondrion, plastid 55.8 45.62
CDY00701 Canola plasma membrane 41.96 45.19
CDY08577 Canola plasma membrane 41.96 44.76
CDY00971 Canola plasma membrane 41.96 44.76
CDY36275 Canola endoplasmic reticulum, extracellular, plasma membrane 38.84 44.16
KXG25366 Sorghum plasma membrane 49.11 44.0
CDY00102 Canola cytosol 29.46 39.05
CDX96872 Canola endoplasmic reticulum, extracellular, plasma membrane 36.61 38.5
GSMUA_Achr6P10010_001 Banana nucleus, peroxisome, plasma membrane 54.46 38.36
CDY16181 Canola endoplasmic reticulum, plasma membrane, vacuole 36.16 37.85
CDX95934 Canola vacuole 36.16 37.67
CDY62212 Canola endoplasmic reticulum, extracellular, plasma membrane 35.71 37.56
CDX85047 Canola endoplasmic reticulum 35.71 37.38
CDY16125 Canola endoplasmic reticulum, extracellular, plasma membrane 34.82 36.79
CDY40925 Canola endoplasmic reticulum 35.27 36.74
CDY19998 Canola endoplasmic reticulum, extracellular 34.82 36.11
CDY33785 Canola endoplasmic reticulum, extracellular, plasma membrane 33.93 35.85
CDX85243 Canola mitochondrion 35.27 35.59
CDY24142 Canola endoplasmic reticulum, plasma membrane, vacuole 33.93 35.51
CDY61620 Canola endoplasmic reticulum 33.48 35.05
CDY09334 Canola endoplasmic reticulum, extracellular, vacuole 33.48 34.72
CDY53680 Canola endoplasmic reticulum, extracellular, vacuole 33.04 34.26
CDY44411 Canola golgi, plasma membrane, plastid 33.48 33.78
CDY04053 Canola endoplasmic reticulum 33.48 33.63
CDY45170 Canola endoplasmic reticulum, extracellular 30.8 32.24
CDY03005 Canola endoplasmic reticulum, extracellular, plasma membrane 30.8 32.24
Protein Annotations
MapMan:22.3.5.2GO:A0A078H2K7UniProt:A0A078H2K7EnsemblPlants:CDY31078ProteinID:CDY31078ProteinID:CDY31078.1
ncoils:CoilGO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783
GO:GO:0005789GO:GO:0016020GO:GO:0016021InterPro:GOLD_domEnsemblPlantsGene:GSBRNA2T00047154001InterPro:IPR009038
PFAM:PF01105PFscan:PS50866PANTHER:PTHR22811PANTHER:PTHR22811:SF68SMART:SM01190InterPro:TMP21-related
TMHMM:TMhelixUniParc:UPI0004EDEBA8::::
Description
BnaA08g26280DBnaA08g26280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H2K7]
Coordinates
chrLK032267:-:151089..152416
Molecular Weight (calculated)
25180.4 Da
IEP (calculated)
7.611
GRAVY (calculated)
-0.184
Length
224 amino acids
Sequence
(BLAST)
001: MNTMREFESS KKKMSDKMRH GLTTAILLFI LVPVGEAIWL DVPTTGTKCV SEEIQSNIVV LADYIIISED HSLKPTISAK VTSPYGNNLH HSENVTHGEF
101: AFTTKESGNY IACFWADAKS HGNKDVSINV EWKTGIATKD WASIAKREKL EGVELEIRKL EGAVEAIHEN LIYLRNKEAD MRTVSEKTNS RVAWCSMMSL
201: GICIVVSGLQ VAYLKHYFEK KKLI
Best Arabidopsis Sequence Match ( AT1G09580.1 )
(BLAST)
001: MKMTAKMRRE FPTAFLLLFL VPVMIPVGEA VWLDVPPTGT KCVSEEIQSN VVVLADYLII SEDHEVMPTI SVKVTSPYGN NLHNMENVTH GQFAFTTQES
101: GNYLACFWAD EKSHGNKNVS INIDWRTGIA AKDWASIAKK EKIEGVELEI RKLEGAVEAI HENILYLRNR EADMRTMSEK TNSRVAWYSI MSLGVCIAVS
201: GFQVLYLKQY FEKKKLI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta3 [Source:UniProtKB/Swiss-Prot;Acc:Q6IDL4]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.