Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G330200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 99.05 | 99.05 |
| TraesCS6D01G309100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 98.1 | 98.1 |
| EES07590 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 79.62 | 81.16 |
| Os02t0768200-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 83.41 | 80.73 |
| Zm00001d018194_P001 | Maize | extracellular | 63.03 | 79.17 |
| TraesCS7B01G074300.1 | Wheat | plasma membrane | 77.73 | 75.93 |
| KRH48283 | Soybean | cytosol | 25.59 | 70.13 |
| GSMUA_Achr6P02320_001 | Banana | endoplasmic reticulum, plasma membrane | 70.14 | 68.52 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 68.25 | 66.67 |
| KRH59179 | Soybean | endoplasmic reticulum | 63.98 | 63.98 |
| VIT_12s0034g01440.t01 | Wine grape | endoplasmic reticulum, extracellular | 64.45 | 62.96 |
| GSMUA_Achr3P20310_001 | Banana | plasma membrane | 63.51 | 62.04 |
| AT1G09580.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 63.03 | 61.29 |
| Bra020010.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi | 60.66 | 60.38 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane, vacuole | 62.56 | 60.27 |
| Bra030786.1-P | Field mustard | extracellular | 60.19 | 60.19 |
| CDX95293 | Canola | endoplasmic reticulum, extracellular, golgi | 61.61 | 60.19 |
| Solyc10g045640.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 60.66 | 59.81 |
| TraesCS5B01G233900.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 59.24 | 59.81 |
| Bra027911.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 61.14 | 59.72 |
| CDY39938 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 61.14 | 59.72 |
| KRH18772 | Soybean | plasma membrane | 60.66 | 59.53 |
| VIT_18s0001g03200.t01 | Wine grape | endoplasmic reticulum | 56.87 | 59.11 |
| KRH16308 | Soybean | endoplasmic reticulum | 60.19 | 59.07 |
| CDY31789 | Canola | plasma membrane | 60.19 | 59.07 |
| KRH43057 | Soybean | extracellular | 43.6 | 58.97 |
| AT1G57620.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 59.24 | 58.96 |
| AT1G21900.1 | Thale cress | plasma membrane | 60.19 | 58.8 |
| Solyc11g013000.1.1 | Tomato | plastid | 58.29 | 58.57 |
| Solyc01g104220.2.1 | Tomato | endoplasmic reticulum | 58.77 | 58.49 |
| KRH53215 | Soybean | endoplasmic reticulum | 58.77 | 58.49 |
| KRH64707 | Soybean | plasma membrane | 59.24 | 58.14 |
| PGSC0003DMT400002378 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 57.82 | 58.1 |
| PGSC0003DMT400061146 | Potato | extracellular | 57.82 | 58.1 |
| Bra038147.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 58.77 | 57.67 |
| CDY23801 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 58.29 | 57.21 |
| KRH10436 | Soybean | endoplasmic reticulum | 58.29 | 57.21 |
| CDX93498 | Canola | endoplasmic reticulum, golgi, plasma membrane | 60.66 | 57.14 |
| CDY20688 | Canola | endoplasmic reticulum, golgi, nucleus | 60.19 | 56.7 |
| CDY31078 | Canola | endoplasmic reticulum | 60.19 | 56.7 |
| CDY04681 | Canola | endoplasmic reticulum | 56.4 | 56.67 |
| CDY50894 | Canola | endoplasmic reticulum, golgi, plasma membrane | 59.24 | 55.8 |
| CDX96570 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 56.87 | 51.5 |
| PGSC0003DMT400045273 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 50.71 | 50.95 |
| PGSC0003DMT400045270 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 51.66 | 50.7 |
| KRH44035 | Soybean | endoplasmic reticulum, mitochondrion, plasma membrane | 58.77 | 50.41 |
| PGSC0003DMT400045277 | Potato | extracellular | 50.71 | 50.0 |
| CDY38827 | Canola | endoplasmic reticulum, extracellular, vacuole | 56.4 | 50.0 |
| Solyc06g060440.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 50.24 | 49.77 |
| Bra016401.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 56.87 | 49.59 |
| CDY08168 | Canola | endoplasmic reticulum | 38.39 | 49.09 |
| Solyc06g060450.2.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 49.76 | 48.84 |
| Solyc06g060430.1.1 | Tomato | cytosol | 18.96 | 43.48 |
| GSMUA_Achr6P10010_001 | Banana | nucleus, peroxisome, plasma membrane | 61.14 | 40.57 |
| TraesCS2B01G180800.1 | Wheat | mitochondrion | 43.6 | 40.35 |
| Bra017957.1-P | Field mustard | endoplasmic reticulum, golgi, vacuole | 39.34 | 26.69 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G361000.1 | EnsemblPlantsGene:TraesCS6B01G361000 | InterPro:GOLD_dom | InterPro:IPR009038 | InterPro:TMP21-related | ncoils:Coil |
| PANTHER:PTHR22811 | PANTHER:PTHR22811:SF68 | PFAM:PF01105 | PFscan:PS50866 | SEG:seg | SignalP:SignalP-noTM |
| SMART:SM01190 | TMHMM:TMhelix | MapMan:22.3.5.2 | : | : | : |
Description
No Description!
Coordinates
chr6B:+:632848768..632850855
Molecular Weight (calculated)
23064.9 Da
IEP (calculated)
6.351
GRAVY (calculated)
0.173
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MPAPAALALA ASLLLAAASI CAEAVWLDMP QTGTKCVSEE IQANVVVLAD YALMYESHPS AHPTIAVKVT SPYGYTLHES GNVTVGQFAF TTSEAGNFLA
101: CFWIDSAEKG SGVSVNLDWK TGIATKDWDA IAKKEKIEGV ELELRKLEVA VQSIHQNMVY LKAREAEMRE VSEKTNGRVA WFSIMSLGVC VVVSVLQLWH
201: LQGYFRKKKL I
101: CFWIDSAEKG SGVSVNLDWK TGIATKDWDA IAKKEKIEGV ELELRKLEVA VQSIHQNMVY LKAREAEMRE VSEKTNGRVA WFSIMSLGVC VVVSVLQLWH
201: LQGYFRKKKL I
001: MKMTAKMRRE FPTAFLLLFL VPVMIPVGEA VWLDVPPTGT KCVSEEIQSN VVVLADYLII SEDHEVMPTI SVKVTSPYGN NLHNMENVTH GQFAFTTQES
101: GNYLACFWAD EKSHGNKNVS INIDWRTGIA AKDWASIAKK EKIEGVELEI RKLEGAVEAI HENILYLRNR EADMRTMSEK TNSRVAWYSI MSLGVCIAVS
201: GFQVLYLKQY FEKKKLI
101: GNYLACFWAD EKSHGNKNVS INIDWRTGIA AKDWASIAKK EKIEGVELEI RKLEGAVEAI HENILYLRNR EADMRTMSEK TNSRVAWYSI MSLGVCIAVS
201: GFQVLYLKQY FEKKKLI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta3 [Source:UniProtKB/Swiss-Prot;Acc:Q6IDL4]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.