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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • plastid 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus, plasma membrane, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc06g060450.2.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 88.78 88.37
PGSC0003DMT400045273 Potato endoplasmic reticulum, extracellular, plasma membrane 80.37 81.9
PGSC0003DMT400045270 Potato endoplasmic reticulum, extracellular, plasma membrane 63.55 63.26
PGSC0003DMT400002378 Potato endoplasmic reticulum, extracellular, plasma membrane 57.01 58.1
KRH53215 Soybean endoplasmic reticulum 55.61 56.13
KRH64707 Soybean plasma membrane 56.07 55.81
PGSC0003DMT400061146 Potato extracellular 54.21 55.24
TraesCS7D01G170400.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 48.6 53.61
GSMUA_Achr6P02320_001 Banana endoplasmic reticulum, plasma membrane 53.74 53.24
TraesCS7A01G169500.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 48.13 53.09
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, plasma membrane 53.27 52.78
EES07590 Sorghum endoplasmic reticulum, extracellular, vacuole 50.93 52.66
CDY04681 Canola endoplasmic reticulum 50.47 51.43
AT1G21900.1 Thale cress plasma membrane 51.87 51.39
Os06t0210100-01 Rice plastid 50.0 51.2
Zm00001d037163_P002 Maize extracellular, plasma membrane 50.47 51.18
TraesCS6B01G361000.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 50.0 50.71
KRH16308 Soybean endoplasmic reticulum 50.93 50.7
Zm00001d018194_P001 Maize extracellular 39.72 50.6
TraesCS6D01G309100.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 49.53 50.24
TraesCS6A01G330200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 49.53 50.24
Os02t0768200-01 Rice endoplasmic reticulum, plasma membrane, vacuole 50.93 50.0
GSMUA_Achr3P20310_001 Banana plasma membrane 50.47 50.0
KRH18772 Soybean plasma membrane 50.0 49.77
EER88046 Sorghum endoplasmic reticulum 49.53 49.53
CDX96570 Canola endoplasmic reticulum, extracellular, plasma membrane 53.74 49.36
TraesCS7B01G074300.1 Wheat plasma membrane 49.53 49.07
CDY38827 Canola endoplasmic reticulum, extracellular, vacuole 53.74 48.32
VIT_18s0001g03200.t01 Wine grape endoplasmic reticulum 45.79 48.28
TraesCS5B01G233900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 46.73 47.85
Zm00001d005857_P001 Maize cytosol, golgi 35.98 47.83
Bra016401.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 53.74 47.52
TraesCS5A01G235500.1 Wheat extracellular, vacuole 46.26 47.14
TraesCS5D01G242600.1 Wheat endoplasmic reticulum 46.26 47.14
EER96837 Sorghum extracellular 44.39 45.67
Os09t0453200-00 Rice endoplasmic reticulum, plasma membrane 44.86 45.28
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, vacuole 46.26 45.21
Os08t0469400-00 Rice endoplasmic reticulum, extracellular, vacuole 27.1 42.34
HORVU5Hr1G067730.1 Barley cytosol, peroxisome 44.39 42.22
CDY08168 Canola endoplasmic reticulum 32.24 41.82
HORVU7Hr1G035390.1 Barley mitochondrion, plastid 49.53 38.69
KXG25366 Sorghum plasma membrane 43.46 37.2
PGSC0003DMT400007416 Potato endoplasmic reticulum, extracellular, vacuole 35.51 35.51
PGSC0003DMT400073002 Potato extracellular 34.58 34.74
PGSC0003DMT400062438 Potato mitochondrion 35.05 34.72
GSMUA_Achr6P10010_001 Banana nucleus, peroxisome, plasma membrane 45.79 30.82
Bra017957.1-P Field mustard endoplasmic reticulum, golgi, vacuole 36.92 25.4
Protein Annotations
MapMan:22.3.5.2GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783
GO:GO:0005789GO:GO:0016020GO:GO:0016021InterPro:GOLD_domInterPro:IPR009038UniProt:M1BHD7
PFAM:PF01105EnsemblPlantsGene:PGSC0003DMG400017563PGSC:PGSC0003DMG400017563EnsemblPlants:PGSC0003DMT400045277PFscan:PS50866PANTHER:PTHR22811
PANTHER:PTHR22811:SF68SMART:SM01190SignalP:SignalP-noTMInterPro:TMP21-relatedTMHMM:TMhelixUniParc:UPI000295C2A8
SEG:seg:::::
Description
Emp24 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400017563]
Coordinates
chr6:+:43394108..43395490
Molecular Weight (calculated)
24622.3 Da
IEP (calculated)
8.069
GRAVY (calculated)
0.103
Length
214 amino acids
Sequence
(BLAST)
001: MKLVKVLKLL LVVTMAMTMA EAIWLEMPST GAKCVYEEIR NNVVVLVEYA IVGVNEHNHY NFLHDLISLK VTSPFGVILH HEENVTNGEF AFTTTEPGNY
101: MACFFMNSQA PDGKVVQIGL DWKIGIAAKD WDSIARKEKI QDIELVLMKF QAWVQAIREK LIYMKNREEE MREVSERTNA AVAWYSGISL SICILAAATQ
201: IWYLKRFFRK KRLI
Best Arabidopsis Sequence Match ( AT1G57620.1 )
(BLAST)
001: MKKKMIPTTI LLSALIFSLS PICEAVWLTV PHTGSKCVSE EIQSNVIVLA DYLVISEEHS IFPTVSVKVT APYGTVLHHR ENTTNGQFAF TTQESGTYLA
101: CFEADAKSHG NKDFSINIDW KTGIAAKDWD SIARKEKIEG VELEFKKLEG AVEAIHENLI YLRNREAEMR IVSEKTNSRV AWYSIMSLGI CIVVSGLQIL
201: YLKQYFEKKK LI
Arabidopsis Description
CYBTransmembrane emp24 domain-containing protein p24delta4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FVU0]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.