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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX96570 Canola endoplasmic reticulum, extracellular, plasma membrane 91.6 93.56
Bra016401.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 94.12 92.56
CDY04681 Canola endoplasmic reticulum 72.27 81.9
AT1G21900.1 Thale cress plasma membrane 72.69 80.09
CDY08168 Canola endoplasmic reticulum 48.32 69.7
KRH53215 Soybean endoplasmic reticulum 56.72 63.68
Solyc11g013000.1.1 Tomato plastid 54.62 61.9
KRH64707 Soybean plasma membrane 55.88 61.86
GSMUA_Achr6P02320_001 Banana endoplasmic reticulum, plasma membrane 55.46 61.11
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, plasma membrane 55.46 61.11
PGSC0003DMT400002378 Potato endoplasmic reticulum, extracellular, plasma membrane 53.36 60.48
TraesCS7D01G170400.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 49.16 60.31
TraesCS7A01G169500.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 49.16 60.31
Os06t0210100-01 Rice plastid 51.26 58.37
KRH18772 Soybean plasma membrane 52.52 58.14
CDY37184 Canola endoplasmic reticulum, peroxisome, plastid 12.18 58.0
CDX95293 Canola endoplasmic reticulum, extracellular, golgi 52.52 57.87
KRH16308 Soybean endoplasmic reticulum 52.1 57.67
CDY31789 Canola plasma membrane 52.1 57.67
CDY39938 Canola endoplasmic reticulum, extracellular, plasma membrane 52.1 57.41
EES07590 Sorghum endoplasmic reticulum, extracellular, vacuole 49.16 56.52
TraesCS6D01G309100.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 50.0 56.4
TraesCS6B01G361000.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 50.0 56.4
CDY23801 Canola endoplasmic reticulum, extracellular, plasma membrane 50.84 56.28
GSMUA_Achr3P20310_001 Banana plasma membrane 50.84 56.02
TraesCS6A01G330200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 49.58 55.92
Zm00001d037163_P002 Maize extracellular, plasma membrane 49.16 55.45
EER88046 Sorghum endoplasmic reticulum 49.58 55.14
TraesCS7B01G074300.1 Wheat plasma membrane 50.0 55.09
Os02t0768200-01 Rice endoplasmic reticulum, plasma membrane, vacuole 50.42 55.05
TraesCS5B01G233900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 47.9 54.55
PGSC0003DMT400045273 Potato endoplasmic reticulum, extracellular, plasma membrane 47.9 54.29
TraesCS5A01G235500.1 Wheat extracellular, vacuole 47.48 53.81
TraesCS5D01G242600.1 Wheat endoplasmic reticulum 47.48 53.81
PGSC0003DMT400045277 Potato extracellular 48.32 53.74
Zm00001d018194_P001 Maize extracellular 37.82 53.57
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, vacuole 49.16 53.42
VIT_18s0001g03200.t01 Wine grape endoplasmic reticulum 45.38 53.2
CDY20688 Canola endoplasmic reticulum, golgi, nucleus 50.0 53.12
CDY31078 Canola endoplasmic reticulum 50.0 53.12
CDX93498 Canola endoplasmic reticulum, golgi, plasma membrane 50.0 53.12
Os09t0453200-00 Rice endoplasmic reticulum, plasma membrane 47.06 52.83
CDY50894 Canola endoplasmic reticulum, golgi, plasma membrane 49.58 52.68
PGSC0003DMT400045270 Potato endoplasmic reticulum, extracellular, plasma membrane 47.06 52.09
Solyc06g060440.1.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 46.22 51.64
Solyc06g060450.2.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 46.64 51.63
EER96837 Sorghum extracellular 44.96 51.44
Zm00001d005857_P001 Maize cytosol, golgi 34.45 50.93
HORVU5Hr1G067730.1 Barley cytosol, peroxisome 46.64 49.33
Os08t0469400-00 Rice endoplasmic reticulum, extracellular, vacuole 27.31 47.45
Solyc06g060430.1.1 Tomato cytosol 17.65 45.65
CDY08577 Canola plasma membrane 39.5 44.76
CDY00971 Canola plasma membrane 39.5 44.76
CDX73906 Canola endoplasmic reticulum, extracellular, plasma membrane 38.66 44.23
CDX73903 Canola endoplasmic reticulum, extracellular, plasma membrane 38.66 44.23
HORVU7Hr1G035390.1 Barley mitochondrion, plastid 50.42 43.8
CDY36275 Canola endoplasmic reticulum, extracellular, plasma membrane 36.13 43.65
CDY00701 Canola plasma membrane 37.82 43.27
KXG25366 Sorghum plasma membrane 42.86 40.8
CDY16125 Canola endoplasmic reticulum, extracellular, plasma membrane 35.29 39.62
CDY33785 Canola endoplasmic reticulum, extracellular, plasma membrane 34.87 39.15
CDX96872 Canola endoplasmic reticulum, extracellular, plasma membrane 34.87 38.97
CDY62212 Canola endoplasmic reticulum, extracellular, plasma membrane 34.45 38.5
CDY16181 Canola endoplasmic reticulum, plasma membrane, vacuole 33.61 37.38
CDX85047 Canola endoplasmic reticulum 33.19 36.92
CDY03005 Canola endoplasmic reticulum, extracellular, plasma membrane 32.35 35.98
CDX95934 Canola vacuole 32.35 35.81
CDY09334 Canola endoplasmic reticulum, extracellular, vacuole 32.35 35.65
CDY45170 Canola endoplasmic reticulum, extracellular 31.51 35.05
GSMUA_Achr6P10010_001 Banana nucleus, peroxisome, plasma membrane 46.64 34.91
CDY40925 Canola endoplasmic reticulum 31.51 34.88
CDY24142 Canola endoplasmic reticulum, plasma membrane, vacuole 31.09 34.58
CDY00102 Canola cytosol 24.37 34.32
CDY61620 Canola endoplasmic reticulum 30.67 34.11
CDY53680 Canola endoplasmic reticulum, extracellular, vacuole 30.67 33.8
CDX85243 Canola mitochondrion 29.83 31.98
CDY19998 Canola endoplasmic reticulum, extracellular 28.99 31.94
CDY44411 Canola golgi, plasma membrane, plastid 28.99 31.08
CDY04053 Canola endoplasmic reticulum 28.99 30.94
Protein Annotations
MapMan:22.3.5.2GO:A0A078HLQ4UniProt:A0A078HLQ4EnsemblPlants:CDY38827ProteinID:CDY38827ProteinID:CDY38827.1
ncoils:CoilGO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783
GO:GO:0005789GO:GO:0016020GO:GO:0016021InterPro:GOLD_domEnsemblPlantsGene:GSBRNA2T00066648001InterPro:IPR009038
PFAM:PF01105PFscan:PS50866PANTHER:PTHR22811PANTHER:PTHR22811:SF76SMART:SM01190SignalP:SignalP-noTM
InterPro:TMP21-relatedTMHMM:TMhelixUniParc:UPI0004EF2261:::
Description
BnaC08g20010DBnaC08g20010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HLQ4]
Coordinates
chrLK032433:-:184291..185612
Molecular Weight (calculated)
26563.8 Da
IEP (calculated)
6.391
GRAVY (calculated)
0.019
Length
238 amino acids
Sequence
(BLAST)
001: MAIRGIVAIS TVVLFLLTVN HGEAIWLTIP ATGGTKCVSE EIQSHVVVMA DYYVVDEQNP GNTPAVSAKV TSPYGNDLHH QDNVTHGQFA FTTQETGNYL
101: ACFSVDSSHP LANPLTLGID WKTGIAAKDW DSVAKKEKIE ASYIYITSPR SDVYYIVMYV YCFLQGVELQ LTRLEGLVQA IRENIDYIKN REGEMREVSE
201: ATNARVAWFS IMSLGVCLSA AGAQIWYLKR YFHKKKLI
Best Arabidopsis Sequence Match ( AT1G21900.1 )
(BLAST)
001: MAINRIAHGS LFLTVVLFFL TVNYGEAIWL TIPTTGGTKC VSEEIQSNVV VLADYYVVDE HNPENTPAVS SKVTSPYGNN LHHQENVTHG QFAFTTQEAG
101: NYLACFWIDS SHHLANPITL GVDWKMGIAA KDWDSVAKKE KIEGVELQLR RLEGLVLSIR ENLNYIKDRE AEMREVSETT NSRVAWFSIM SLGVCVVVVG
201: SQILYLKRYF HKKKLI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta5 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWM6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.