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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • endoplasmic reticulum 3
  • extracellular 2
  • vacuole 2
  • plasma membrane 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX93498 Canola endoplasmic reticulum, golgi, plasma membrane 95.98 95.98
CDY31078 Canola endoplasmic reticulum 79.46 79.46
AT1G09580.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 76.34 78.8
CDY20688 Canola endoplasmic reticulum, golgi, nucleus 78.12 78.12
KRH48283 Soybean cytosol 24.55 71.43
CDY31789 Canola plasma membrane 66.52 69.3
CDY23801 Canola endoplasmic reticulum, extracellular, plasma membrane 66.07 68.84
CDY39938 Canola endoplasmic reticulum, extracellular, plasma membrane 63.84 66.2
CDX95293 Canola endoplasmic reticulum, extracellular, golgi 63.84 66.2
KRH59179 Soybean endoplasmic reticulum 60.27 63.98
VIT_12s0034g01440.t01 Wine grape endoplasmic reticulum, extracellular 60.27 62.5
TraesCS7D01G170400.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 54.02 62.37
TraesCS7A01G169500.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 54.02 62.37
Zm00001d037163_P002 Maize extracellular, plasma membrane 58.04 61.61
EES07590 Sorghum endoplasmic reticulum, extracellular, vacuole 56.25 60.87
Os06t0210100-01 Rice plastid 56.7 60.77
GSMUA_Achr6P02320_001 Banana endoplasmic reticulum, plasma membrane 58.04 60.19
EER88046 Sorghum endoplasmic reticulum 57.14 59.81
TraesCS6B01G361000.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 55.8 59.24
Os02t0768200-01 Rice endoplasmic reticulum, plasma membrane, vacuole 57.59 59.17
TraesCS6A01G330200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 55.36 58.77
TraesCS6D01G309100.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 55.36 58.77
Solyc10g045640.1.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 55.8 58.41
KRH43057 Soybean extracellular 40.62 58.33
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, plasma membrane 56.25 58.33
KRH10436 Soybean endoplasmic reticulum 54.91 57.21
Zm00001d018194_P001 Maize extracellular 42.86 57.14
TraesCS7B01G074300.1 Wheat plasma membrane 54.91 56.94
Solyc01g104220.2.1 Tomato endoplasmic reticulum 53.57 56.6
PGSC0003DMT400061146 Potato extracellular 52.23 55.71
CDY04681 Canola endoplasmic reticulum 52.23 55.71
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, vacuole 54.46 55.71
TraesCS5B01G233900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 51.34 55.02
GSMUA_Achr3P20310_001 Banana plasma membrane 52.68 54.63
EER96837 Sorghum extracellular 50.0 53.85
TraesCS5A01G235500.1 Wheat extracellular, vacuole 50.45 53.81
TraesCS5D01G242600.1 Wheat endoplasmic reticulum 50.45 53.81
Zm00001d005857_P001 Maize cytosol, golgi 37.95 52.8
Os09t0453200-00 Rice endoplasmic reticulum, plasma membrane 49.55 52.36
Os08t0469400-00 Rice endoplasmic reticulum, extracellular, vacuole 31.25 51.09
CDX96570 Canola endoplasmic reticulum, extracellular, plasma membrane 53.12 51.07
KRH44035 Soybean endoplasmic reticulum, mitochondrion, plasma membrane 54.91 50.0
CDY37184 Canola endoplasmic reticulum, peroxisome, plastid 11.16 50.0
HORVU5Hr1G067730.1 Barley cytosol, peroxisome 50.0 49.78
CDY38827 Canola endoplasmic reticulum, extracellular, vacuole 52.68 49.58
CDY08168 Canola endoplasmic reticulum 33.93 46.06
HORVU7Hr1G035390.1 Barley mitochondrion, plastid 56.25 45.99
CDY36275 Canola endoplasmic reticulum, extracellular, plasma membrane 40.18 45.69
CDX73903 Canola endoplasmic reticulum, extracellular, plasma membrane 42.41 45.67
CDX73906 Canola endoplasmic reticulum, extracellular, plasma membrane 42.41 45.67
CDY00701 Canola plasma membrane 41.07 44.23
CDY00971 Canola plasma membrane 41.07 43.81
CDY08577 Canola plasma membrane 41.07 43.81
KXG25366 Sorghum plasma membrane 45.98 41.2
CDY00102 Canola cytosol 29.02 38.46
CDY16125 Canola endoplasmic reticulum, extracellular, plasma membrane 35.71 37.74
GSMUA_Achr6P10010_001 Banana nucleus, peroxisome, plasma membrane 53.12 37.42
CDX85047 Canola endoplasmic reticulum 35.27 36.92
CDY16181 Canola endoplasmic reticulum, plasma membrane, vacuole 35.27 36.92
CDY33785 Canola endoplasmic reticulum, extracellular, plasma membrane 34.82 36.79
CDX95934 Canola vacuole 35.27 36.74
CDY62212 Canola endoplasmic reticulum, extracellular, plasma membrane 34.82 36.62
CDX96872 Canola endoplasmic reticulum, extracellular, plasma membrane 34.82 36.62
CDY40925 Canola endoplasmic reticulum 34.38 35.81
CDY19998 Canola endoplasmic reticulum, extracellular 33.93 35.19
CDX85243 Canola mitochondrion 33.93 34.23
CDY61620 Canola endoplasmic reticulum 32.14 33.64
CDY09334 Canola endoplasmic reticulum, extracellular, vacuole 32.14 33.33
CDY03005 Canola endoplasmic reticulum, extracellular, plasma membrane 31.7 33.18
CDY45170 Canola endoplasmic reticulum, extracellular 31.7 33.18
CDY24142 Canola endoplasmic reticulum, plasma membrane, vacuole 31.7 33.18
CDY53680 Canola endoplasmic reticulum, extracellular, vacuole 31.7 32.87
CDY44411 Canola golgi, plasma membrane, plastid 32.14 32.43
CDY04053 Canola endoplasmic reticulum 32.14 32.29
Protein Annotations
MapMan:22.3.5.2GO:A0A078IN97UniProt:A0A078IN97EnsemblPlants:CDY50894ProteinID:CDY50894ProteinID:CDY50894.1
ncoils:CoilGO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783
GO:GO:0005789GO:GO:0016020GO:GO:0016021InterPro:GOLD_domEnsemblPlantsGene:GSBRNA2T00097729001InterPro:IPR009038
PFAM:PF01105PFscan:PS50866PANTHER:PTHR22811PANTHER:PTHR22811:SF76SMART:SM01190SignalP:SignalP-TM
InterPro:TMP21-relatedTMHMM:TMhelixUniParc:UPI0004EE2126SEG:seg::
Description
BnaCnng19860DBnaCnng19860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IN97]
Coordinates
chrLK032946:-:35606..37138
Molecular Weight (calculated)
24837.3 Da
IEP (calculated)
8.450
GRAVY (calculated)
-0.030
Length
224 amino acids
Sequence
(BLAST)
001: MNTMGKSVSS MKMAAKKMQH GLLTALLLLI IVPVGEGVWL DVPTTGTKCV SEEIQSNVVV LADYIIISED DSLLPTISVK VTSPYGKNLH HMENVTVGEF
101: AFTTQESGNY MACFTADTKS HGNKNVSISV DWKTGIAAKD WKNIAKKEKI EGVELEIRKL EASVEAIHEN LVYIRNKEAD MRTVSEKTNS RVAWFSTMSM
201: GICIAVSGIQ VVYLKQYFQK KKLI
Best Arabidopsis Sequence Match ( AT1G09580.1 )
(BLAST)
001: MKMTAKMRRE FPTAFLLLFL VPVMIPVGEA VWLDVPPTGT KCVSEEIQSN VVVLADYLII SEDHEVMPTI SVKVTSPYGN NLHNMENVTH GQFAFTTQES
101: GNYLACFWAD EKSHGNKNVS INIDWRTGIA AKDWASIAKK EKIEGVELEI RKLEGAVEAI HENILYLRNR EADMRTMSEK TNSRVAWYSI MSLGVCIAVS
201: GFQVLYLKQY FEKKKLI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta3 [Source:UniProtKB/Swiss-Prot;Acc:Q6IDL4]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.