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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 5
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY62212 Canola endoplasmic reticulum, extracellular, plasma membrane 98.59 98.59
CDY33785 Canola endoplasmic reticulum, extracellular, plasma membrane 90.61 91.04
CDY16125 Canola endoplasmic reticulum, extracellular, plasma membrane 89.67 90.09
Bra016715.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 81.69 86.57
AT1G14010.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 82.63 83.02
CDY37184 Canola endoplasmic reticulum, peroxisome, plastid 19.25 82.0
CDY03005 Canola endoplasmic reticulum, extracellular, plasma membrane 72.77 72.43
CDY45170 Canola endoplasmic reticulum, extracellular 72.3 71.96
CDY09334 Canola endoplasmic reticulum, extracellular, vacuole 71.83 70.83
CDY53680 Canola endoplasmic reticulum, extracellular, vacuole 70.89 69.91
GSMUA_Achr1P21760_001 Banana cytosol 51.17 64.5
CDY40925 Canola endoplasmic reticulum 64.32 63.72
CDY16181 Canola endoplasmic reticulum, plasma membrane, vacuole 63.85 63.55
CDX95934 Canola vacuole 63.85 63.26
CDX85047 Canola endoplasmic reticulum 63.38 63.08
GSMUA_AchrUn_... Banana cytosol 49.77 62.72
CDY24142 Canola endoplasmic reticulum, plasma membrane, vacuole 61.97 61.68
KRH50555 Soybean endoplasmic reticulum 63.85 61.54
VIT_01s0182g00030.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 60.56 60.85
CDY61620 Canola endoplasmic reticulum 61.03 60.75
KRG89554 Soybean endoplasmic reticulum 61.97 60.0
PGSC0003DMT400007416 Potato endoplasmic reticulum, extracellular, vacuole 58.22 57.94
Solyc05g013130.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 57.75 57.75
CDY00102 Canola cytosol 45.54 57.4
PGSC0003DMT400073002 Potato extracellular 57.28 57.28
PGSC0003DMT400062438 Potato mitochondrion 57.75 56.94
Solyc04g005570.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 56.81 56.28
Solyc01g010940.2.1 Tomato nucleus, plastid 55.4 54.63
Zm00001d022238_P001 Maize mitochondrion 56.81 52.84
EER92205 Sorghum endoplasmic reticulum, extracellular, plasma membrane 53.05 52.8
CDY44411 Canola golgi, plasma membrane, plastid 54.93 52.7
Os07t0632700-01 Rice plasma membrane 56.81 52.61
EER97600 Sorghum mitochondrion 56.34 52.4
CDY19998 Canola endoplasmic reticulum, extracellular 53.05 52.31
CDY04053 Canola endoplasmic reticulum 54.46 52.02
CDX85243 Canola mitochondrion 53.99 51.8
Zm00001d006951_P001 Maize mitochondrion 55.4 51.53
TraesCS2B01G180800.1 Wheat mitochondrion 54.93 51.32
TraesCS2D01G161400.1 Wheat endoplasmic reticulum, plastid 54.46 50.88
TraesCS2A01G155600.1 Wheat golgi 53.99 50.44
KRH70789 Soybean cytosol, vacuole 16.9 49.32
HORVU2Hr1G028220.5 Barley endoplasmic reticulum, extracellular 53.52 49.14
Os03t0376000-01 Rice endoplasmic reticulum, plasma membrane 53.05 48.71
KRH70788 Soybean extracellular 31.46 46.85
CDY04681 Canola endoplasmic reticulum 38.5 39.05
Zm00001d047163_P001 Maize endoplasmic reticulum, extracellular, vacuole 42.72 36.69
CDY31078 Canola endoplasmic reticulum 38.5 36.61
CDY20688 Canola endoplasmic reticulum, golgi, nucleus 38.5 36.61
CDX96570 Canola endoplasmic reticulum, extracellular, plasma membrane 39.44 36.05
CDY39938 Canola endoplasmic reticulum, extracellular, plasma membrane 36.15 35.65
CDX95293 Canola endoplasmic reticulum, extracellular, golgi 36.15 35.65
CDY31789 Canola plasma membrane 35.68 35.35
CDX93498 Canola endoplasmic reticulum, golgi, plasma membrane 37.09 35.27
CDY08168 Canola endoplasmic reticulum 27.23 35.15
CDX73903 Canola endoplasmic reticulum, extracellular, plasma membrane 34.27 35.1
CDX73906 Canola endoplasmic reticulum, extracellular, plasma membrane 34.27 35.1
CDY00701 Canola plasma membrane 34.27 35.1
CDY23801 Canola endoplasmic reticulum, extracellular, plasma membrane 35.21 34.88
CDY38827 Canola endoplasmic reticulum, extracellular, vacuole 38.97 34.87
CDY50894 Canola endoplasmic reticulum, golgi, plasma membrane 36.62 34.82
CDY00971 Canola plasma membrane 33.8 34.29
CDY08577 Canola plasma membrane 33.8 34.29
CDY36275 Canola endoplasmic reticulum, extracellular, plasma membrane 29.58 31.98
Protein Annotations
MapMan:22.3.5.2GO:A0A078E741EnsemblPlants:CDX96872ProteinID:CDX96872ProteinID:CDX96872.1GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020
GO:GO:0016021InterPro:GOLD_domEnsemblPlantsGene:GSBRNA2T00103116001InterPro:IPR009038PFAM:PF01105PFscan:PS50866
PANTHER:PTHR22811PANTHER:PTHR22811:SF47SMART:SM01190SignalP:SignalP-noTMInterPro:TMP21-relatedTMHMM:TMhelix
UniParc:UPI0004EDDBE6SEG:seg::::
Description
BnaA08g24150D
Coordinates
chrLK031895:+:1302376..1304024
Molecular Weight (calculated)
24040.8 Da
IEP (calculated)
6.368
GRAVY (calculated)
-0.167
Length
213 amino acids
Sequence
(BLAST)
001: MDLHRSSTII LLILSILSPA TLSMRYELLS GHTKCISEEI HANAMSVGKY SIVNPHEDHP LPASHKITVK VTSPQGTAYH EADGVSTGQF SLTAVETGDY
101: ITCISAVDHK PETMLTIDFD WRTGVHSKDW PSVAKRSQVE NMESEVKKLF DTVTSIHDEM FYLRDREEEM HELNISTNSK MAWLSFLSLG VCLSVAGLQF
201: WHLKTFFEKK KLI
Best Arabidopsis Sequence Match ( AT1G14010.1 )
(BLAST)
001: MNHRRSSIVL LILSILSPVT LSIRYELLSG HTKCISEEIH ANAMTIGKYS IINPHEDHPL PSSHKVTVRV TSPQGTAYHE SDGVESGQFS FVAVETGDYI
101: SCFSAVDHKP ETTLIIDFDW RTGIHTKDWS NVAKKSQVET MEFEVKKLFE TVNGIHDEMF YLRDREEEMH NLNIATNSKM AWLSFVSLAV CLSVAGLQFW
201: HLKTFFQKKK LI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta7 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYG1]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.