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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 2
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc05g013130.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 96.24 96.24
PGSC0003DMT400007416 Potato endoplasmic reticulum, extracellular, vacuole 76.06 75.7
PGSC0003DMT400062438 Potato mitochondrion 74.18 73.15
CDY37184 Canola endoplasmic reticulum, peroxisome, plastid 16.9 72.0
KRH50555 Soybean endoplasmic reticulum 69.48 66.97
VIT_01s0182g00030.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 64.32 64.62
KRG89554 Soybean endoplasmic reticulum 65.73 63.64
GSMUA_Achr1P21760_001 Banana cytosol 49.77 62.72
GSMUA_AchrUn_... Banana cytosol 49.77 62.72
AT1G26690.1 Thale cress endoplasmic reticulum, extracellular, vacuole 61.03 60.75
CDY16181 Canola endoplasmic reticulum, plasma membrane, vacuole 60.56 60.28
CDX95934 Canola vacuole 60.56 60.0
CDX85047 Canola endoplasmic reticulum 60.09 59.81
Bra024694.1-P Field mustard endoplasmic reticulum, plasma membrane 60.09 59.81
AT1G69460.1 Thale cress endoplasmic reticulum, extracellular, vacuole 60.09 59.81
Bra004382.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 60.09 59.53
CDY40925 Canola endoplasmic reticulum 59.62 59.07
Bra026866.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 58.69 58.96
CDY16125 Canola endoplasmic reticulum, extracellular, plasma membrane 58.69 58.96
CDY33785 Canola endoplasmic reticulum, extracellular, plasma membrane 58.69 58.96
AT1G14010.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 57.75 58.02
CDY24142 Canola endoplasmic reticulum, plasma membrane, vacuole 58.22 57.94
CDX96872 Canola endoplasmic reticulum, extracellular, plasma membrane 57.28 57.28
CDY62212 Canola endoplasmic reticulum, extracellular, plasma membrane 56.81 56.81
CDY61620 Canola endoplasmic reticulum 56.34 56.07
EER92205 Sorghum endoplasmic reticulum, extracellular, plasma membrane 56.34 56.07
Bra016283.1-P Field mustard endoplasmic reticulum 56.34 56.07
Zm00001d022238_P001 Maize mitochondrion 59.62 55.46
EER97600 Sorghum mitochondrion 59.15 55.02
Zm00001d006951_P001 Maize mitochondrion 58.22 54.15
AT2G03290.1 Thale cress extracellular 53.99 53.99
TraesCS2B01G180800.1 Wheat mitochondrion 57.75 53.95
Os07t0632700-01 Rice plasma membrane 58.22 53.91
KRH70788 Soybean extracellular 36.15 53.85
TraesCS2A01G155600.1 Wheat golgi 57.28 53.51
TraesCS2D01G161400.1 Wheat endoplasmic reticulum, plastid 56.81 53.07
HORVU2Hr1G028220.5 Barley endoplasmic reticulum, extracellular 57.28 52.59
Bra026559.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 52.58 51.85
Os03t0376000-01 Rice endoplasmic reticulum, plasma membrane 56.34 51.72
CDY03005 Canola endoplasmic reticulum, extracellular, plasma membrane 51.64 51.4
CDY09334 Canola endoplasmic reticulum, extracellular, vacuole 52.11 51.39
CDY53680 Canola endoplasmic reticulum, extracellular, vacuole 51.64 50.93
Bra024781.1-P Field mustard endoplasmic reticulum, extracellular 50.7 50.47
CDY45170 Canola endoplasmic reticulum, extracellular 50.7 50.47
AT2G03040.1 Thale cress extracellular 37.56 48.19
Bra016715.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 42.72 45.27
KRH70789 Soybean cytosol, vacuole 15.49 45.21
PGSC0003DMT400002378 Potato endoplasmic reticulum, extracellular, plasma membrane 39.44 40.0
Zm00001d047163_P001 Maize endoplasmic reticulum, extracellular, vacuole 45.07 38.71
PGSC0003DMT400045273 Potato endoplasmic reticulum, extracellular, plasma membrane 34.74 35.24
PGSC0003DMT400045277 Potato extracellular 34.74 34.58
PGSC0003DMT400061146 Potato extracellular 33.8 34.29
PGSC0003DMT400045270 Potato endoplasmic reticulum, extracellular, plasma membrane 33.8 33.49
Protein Annotations
EntrezGene:102586942MapMan:22.3.5.2GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005783GO:GO:0005789GO:GO:0016020GO:GO:0016021InterPro:GOLD_domInterPro:IPR009038
UniProt:M1CRD0PFAM:PF01105EnsemblPlantsGene:PGSC0003DMG400028393PGSC:PGSC0003DMG400028393EnsemblPlants:PGSC0003DMT400073002PFscan:PS50866
PANTHER:PTHR22811PANTHER:PTHR22811:SF47SMART:SM01190SignalP:SignalP-noTMInterPro:TMP21-relatedTMHMM:TMhelix
UniParc:UPI000295BD98RefSeq:XP_006348751.1SEG:seg:::
Description
Transmembrane emp24 domain-containing protein 10 [Source:PGSC_GENE;Acc:PGSC0003DMG400028393]
Coordinates
chr5:+:79707..82751
Molecular Weight (calculated)
24197.3 Da
IEP (calculated)
6.954
GRAVY (calculated)
-0.120
Length
213 amino acids
Sequence
(BLAST)
001: MIQRRNIQLV VVILGFIATQ VESLRFDLQS GLTKCIAEDI KSHAMTVGKY HIVNPNEGYP LPDTHKVTVR VTSTYGNTYH QGDNVVEGHF AFEAAEAGDY
101: MTCFFAADHK PPVTVTLDFD WKTGVAAKDW TSVAKKGSVE VMEFELKKML ENVKAIHDEM FFLREREAEM QELNRSTNSK MAWMTGLSIF LCLGVAGLQL
201: WHLKTFFEKK KLI
Best Arabidopsis Sequence Match ( AT1G26690.1 )
(BLAST)
001: MFLRSLNLCT ILLFLAISSQ VSQSLHFELQ SGRTKCISED IKSNSMTVGK YTVVNPNEAH PSPQSHKISI RVTSSYGNTY HHAEDVESGQ FAFTAVESGD
101: YMACYTAVDH KPEVTLSIDF DWRTGVQSKS WSSVAKKSQV EVMEFDVKRL IETVNSIHEE MFYLREREEE MQNLNRATNS KMAWLSFLSL FVCLGVAGMQ
201: FVHLKTFFEK KKVI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQY3]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.